Publication:
A large-scale peripheral blood cell dataset for automated hematological analysis

dc.contributor.coauthorYarıkan, A.E.
dc.contributor.coauthorKuş, Z.
dc.contributor.coauthorAydin, M.
dc.contributor.coauthorPalaoğlu, K.E.
dc.contributor.coauthorÖzçelik, C.
dc.contributor.coauthorKiraz, B.
dc.contributor.departmentKUH (Koç University Hospital)
dc.contributor.departmentSchool of Medicine
dc.contributor.departmentDepartment of Electrical and Electronics Engineering
dc.contributor.departmentDepartment of Physics
dc.contributor.kuauthorÖrer, Can
dc.contributor.kuauthorAkyıldız, Volkan
dc.contributor.kuauthorİncir, Said
dc.contributor.kuauthorKiraz, Alper
dc.contributor.kuauthorBaysal, Kemal
dc.contributor.schoolcollegeinstituteKUH (KOÇ UNIVERSITY HOSPITAL)
dc.contributor.schoolcollegeinstituteSCHOOL OF MEDICINE
dc.contributor.schoolcollegeinstituteCollege of Sciences
dc.contributor.schoolcollegeinstituteCollege of Engineering
dc.date.accessioned2026-07-02T07:02:23Z
dc.date.available2026-03-27
dc.date.issued2026
dc.description.abstractWhite blood cell classification is fundamental to hematological diagnosis, yet existing datasets are limited in scale and class diversity. We present a comprehensive peripheral blood cell dataset comprising 31,489 high-resolution microscopic images across 13 distinct cell classes, representing the largest publicly available collection for automated blood cell analysis. Images are acquired using the Sysmex DI-60 system from May-Grünwald-Giemsa-stained blood smears at 100 × magnification under standardized laboratory conditions. Expert hematologists with over 10 years of experience performed manual annotation with high inter-rater agreement (Cohen's kappa >0.85 for all classes). The dataset includes common cell types such as segmented neutrophils and lymphocytes, alongside diagnostically critical but rare subtypes, including myelocytes, blasts, and reactive lymphocytes. Images are organized into training, validation, and test splits (70:10:20 ratio) with consistent 368 × 368 pixel resolution. Baseline experiments using 14 deep learning architectures demonstrate the dataset's utility, with DenseNet-121 achieving 95.23% accuracy. KU-Optofil PBC Dataset addresses critical gaps in medical image analysis datasets and supports the development of robust automated hematology systems for clinical applications.
dc.description.fulltextNo
dc.description.harvestedfromManual
dc.description.indexedbyWOS
dc.description.indexedbyScopus
dc.description.indexedbyPubMed
dc.description.openaccessGold
dc.description.publisherscopeInternational
dc.description.readpublishN/A
dc.description.sponsoredbyTubitakEuTÜBİTAK
dc.description.sponsorshipThis project is supported by the Scientific and Technological Research Council of Turkey (TÜBİTAK) TEYDEB 1501 grant with a project number of 3231130. A. Kiraz acknowledges partial support from the Turkish Academy of Sciences (TÜBA)
dc.description.versionPublished Version
dc.identifier.WoSQuartileQ1
dc.identifier.doi10.1038/s41597-026-06761-y
dc.identifier.eissn2052-4463
dc.identifier.embargoNo
dc.identifier.grantno3231130
dc.identifier.issue1
dc.identifier.pubmed41651863
dc.identifier.scopus2-s2.0-105033980275
dc.identifier.urihttps://doi.org/10.1038/s41597-026-06761-y
dc.identifier.urihttps://hdl.handle.net/20.500.14288/32775
dc.identifier.volume13
dc.identifier.wos1719784200001
dc.keywordsWhite blood cell classification
dc.keywordsPeripheral blood cell dataset
dc.keywordsAutomated hematology systems
dc.languageeng
dc.publisherNature Portfolio
dc.relation.affiliationKoç University
dc.relation.collectionKoç University Institutional Repository
dc.relation.ispartofScientific Data
dc.relation.openaccessN/A
dc.rightsN/A
dc.rights.uriN/A
dc.subjectMedical image analysis
dc.titleA large-scale peripheral blood cell dataset for automated hematological analysis
dc.typeJournal Article
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