Publication: Universal features of fluctuations in globular proteins
| dc.contributor.department | Department of Chemical and Biological Engineering | |
| dc.contributor.facultymember | Yes | |
| dc.contributor.kuauthor | Erman, Burak | |
| dc.contributor.schoolcollegeinstitute | College of Engineering | |
| dc.date.accessioned | 2024-11-09T23:47:02Z | |
| dc.date.issued | 2016 | |
| dc.description.abstract | Using data from 2000 non-homologous protein crystal structures, we show that the distribution of residue B factors of proteins collapses onto a single master curve. We show by maximum entropy arguments that this curve is a Gamma function whose order and dispersion are obtained from experimental data. The distribution for any given specific protein can be generated from the master curve by a linear transformation. Any perturbation of the B factor distribution of a protein, imposed at constant energy, causes a decrease in the entropy of the protein relative to that of the reference state. (C) 2016 Wiley Periodicals, Inc. | |
| dc.description.fulltext | No | |
| dc.description.harvestedfrom | Manual | |
| dc.description.indexedby | WOS | |
| dc.description.indexedby | Scopus | |
| dc.description.indexedby | PubMed | |
| dc.description.openaccess | NO | |
| dc.description.peerreviewstatus | N/A | |
| dc.description.publisherscope | International | |
| dc.description.readpublish | N/A | |
| dc.description.sponsoredbyTubitakEu | N/A | |
| dc.description.studentonlypublication | No | |
| dc.description.studentpublication | No | |
| dc.description.version | N/A | |
| dc.identifier.doi | 10.1002/prot.25032 | |
| dc.identifier.eissn | 1097-0134 | |
| dc.identifier.embargo | N/A | |
| dc.identifier.issn | 0887-3585 | |
| dc.identifier.quartile | Bakılacak | |
| dc.identifier.scopus | 2-s2.0-84961859550 | |
| dc.identifier.uri | https://doi.org/10.1002/prot.25032 | |
| dc.identifier.uri | https://hdl.handle.net/20.500.14288/14060 | |
| dc.identifier.wos | 381160100001 | |
| dc.keywords | Residue fluctuations | |
| dc.keywords | B factors | |
| dc.keywords | Gamma function | |
| dc.keywords | Gaussian network model | |
| dc.keywords | Entropy change | |
| dc.keywords | Distribution of fluctuations | |
| dc.language.iso | eng | |
| dc.publisher | Wiley-Blackwell | |
| dc.relation.affiliation | Koç University | |
| dc.relation.collection | Koç University Institutional Repository | |
| dc.relation.ispartof | Proteins-Structure Function and Bioinformatics | |
| dc.relation.openaccess | N/A | |
| dc.rights | N/A | |
| dc.subject | Biochemistry | |
| dc.subject | Molecular biology | |
| dc.subject | Biophysics | |
| dc.title | Universal features of fluctuations in globular proteins | |
| dc.type | Journal Article | |
| dspace.entity.type | Publication | |
| local.contributor.kuauthor | Erman, Burak | |
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