Publication:
Label-free differentiation of functional zones in mature mouse placenta using micro-Raman imaging

dc.contributor.coauthorİnanç, Arda
dc.contributor.coauthorBektaş, Nayce İlayda
dc.contributor.coauthorKecoğlu, İbrahim
dc.contributor.coauthorParlatan, Uğur
dc.contributor.coauthorUnlu, Mehmet Burçin
dc.contributor.kuauthorDurkut, Begüm
dc.contributor.kuauthorUçak, Melike
dc.contributor.kuauthorÖzenci, Çiler Çelik
dc.contributor.researchcenterKoç University Research Center for Translational Medicine (KUTTAM) / Koç Üniversitesi Translasyonel Tıp Araştırma Merkezi (KUTTAM)
dc.contributor.schoolcollegeinstituteGraduate School of Health Sciences
dc.contributor.schoolcollegeinstituteSchool of Medicine
dc.date.accessioned2024-12-29T09:36:38Z
dc.date.issued2024
dc.description.abstractIn histopathology, it is highly crucial to have chemical and structural information about tissues. Additionally, the segmentation of zones within a tissue plays a vital role in investigating the functions of these regions for better diagnosis and treatment. The placenta plays a vital role in embryonic and fetal development and in diagnosing some diseases associated with its dysfunction. This study provides a label -free approach to obtain the images of mature mouse placenta together with the chemical differences between the tissue compartments using Raman spectroscopy. To generate the Raman images, spectra of placental tissue were collected using a custom-built optical setup. The pre-processed spectra were analyzed using statistical and machine learning methods to acquire the Raman maps. We found that the placental regions called decidua and the labyrinth zone are biochemically distinct from the junctional zone. A histologist performed a comparison and evaluation of the Raman map with histological images of the placental tissue, and they were found to agree. The results of this study show that Raman spectroscopy offers the possibility of label -free monitoring of the placental tissue from mature mice while simultaneously revealing crucial structural information about the zones.
dc.description.indexedbyWoS
dc.description.indexedbyScopus
dc.description.indexedbyPubMed
dc.description.issue5
dc.description.openaccessgold, Green Submitted, Green Published
dc.description.publisherscopeInternational
dc.description.sponsorsTUBİTAK
dc.description.volume15
dc.identifier.doi10.1364/BOE.521500
dc.identifier.issn2156-7085
dc.identifier.quartileQ2
dc.identifier.scopus2-s2.0-85192683976
dc.identifier.urihttps://doi.org/10.1364/BOE.521500
dc.identifier.urihttps://hdl.handle.net/20.500.14288/22095
dc.identifier.wos1254811900005
dc.keywordsRaman spectrometry
dc.keywordsPrincipal component analysis
dc.keywordsSpectroscopy
dc.languageen
dc.publisherOptica Publishing Group
dc.sourceBiomedical Optics Express
dc.subjectBiochemical research methods
dc.subjectOptics
dc.subjectRadiology,nuclear medicine and medical imaging
dc.titleLabel-free differentiation of functional zones in mature mouse placenta using micro-Raman imaging
dc.typeJournal article
dspace.entity.typePublication
local.contributor.kuauthorDurkut, Begüm
local.contributor.kuauthorUçak, Melike
local.contributor.kuauthorÖzenci, Çiler Çelik

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