Publication: Novel ALK immunohistochemistry assay (clone OTI1A4, Dako) is a sensitive, reliable marker for identifying ALK rearrangements in lung adenocarcinomas : a validation study
dc.contributor.coauthor | Bozkurtlar, Emine | |
dc.contributor.department | KUTTAM (Koç University Research Center for Translational Medicine) | |
dc.contributor.department | KUISCID (Koç University İşbank Center for Infectious Diseases) | |
dc.contributor.department | School of Medicine | |
dc.contributor.kuauthor | Bulutay, Pınar | |
dc.contributor.kuauthor | Eren, Özgür Can | |
dc.contributor.kuauthor | Baygül, Arzu Eden | |
dc.contributor.kuauthor | Kulaç, İbrahim | |
dc.contributor.kuauthor | Meriçöz, Çisel Aydın | |
dc.contributor.schoolcollegeinstitute | Research Center | |
dc.contributor.schoolcollegeinstitute | SCHOOL OF MEDICINE | |
dc.date.accessioned | 2025-01-19T10:30:40Z | |
dc.date.issued | 2023 | |
dc.description.abstract | Objectives We present the first study validating the recent Dako ALK assay (clone OTI1A4, in vitro diagnostic) for detecting ALK rearrangements in lung adenocarcinoma.Methods Lung adenocarcinoma cases between 2011 and 2023 were retrospectively collected to create a cohort of 203 samples. Cases were stained with Dako ALK OTI1A4 and Ventana ALK D5F3 and reviewed by 3 pathologists independently. Correlation between assays, including their sensitivity and specificity, was evaluated.Results The cohort (n = 203) consisted of resections, core needle biopsies, and cell blocks. Agreement between Dako ALK OTI1A4 and Ventana ALK D5F3 assays was "almost perfect," with & kappa; = 0.89. The sensitivity and specificity of the Dako ALK OTI1A4 assay were 93.3% and 96%, respectively, in a subgroup of 55 molecularly confirmed cases (n = 30 with and n = 25 without ALK rearrangement).Conclusions Immunohistochemistry-based assays provide a valid and reasonably priced alternative, especially in settings where molecular confirmatory tests are neither offered nor accessible. Given high interassay and molecular concordance, we propose that the novel Dako OTI1A4 assay can be reliably used to identify cases with ALK rearrangement. | |
dc.description.indexedby | WOS | |
dc.description.indexedby | Scopus | |
dc.description.indexedby | PubMed | |
dc.description.issue | 1 | |
dc.description.openaccess | hybrid | |
dc.description.publisherscope | International | |
dc.description.sponsoredbyTubitakEu | N/A | |
dc.description.sponsorship | This study will be presented as a platform presentation at the European Society of Pathology Annual Meeting; September 9-13, 2023; Dublin, Ireland. | |
dc.description.volume | 161 | |
dc.identifier.doi | 10.1093/ajcp/aqad111 | |
dc.identifier.eissn | 1943-7722 | |
dc.identifier.issn | 0002-9173 | |
dc.identifier.quartile | Q2 | |
dc.identifier.scopus | 2-s2.0-85181760859 | |
dc.identifier.uri | https://doi.org/10.1093/ajcp/aqad111 | |
dc.identifier.uri | https://hdl.handle.net/20.500.14288/26085 | |
dc.identifier.wos | 1060980600001 | |
dc.keywords | Lung adenocarcinoma | |
dc.keywords | Immunohistochemistry | |
dc.keywords | Validation | |
dc.keywords | Predictive testing | |
dc.language.iso | eng | |
dc.publisher | Oxford University Press | |
dc.relation.grantno | This study will be presented as a platform presentation at the European Society of Pathology Annual Meeting; September 9-13, 2023; Dublin, Ireland.; Dublin, Ireland | |
dc.relation.ispartof | American Journal of Clinical Pathology | |
dc.subject | Pathology | |
dc.title | Novel ALK immunohistochemistry assay (clone OTI1A4, Dako) is a sensitive, reliable marker for identifying ALK rearrangements in lung adenocarcinomas : a validation study | |
dc.type | Journal Article | |
dspace.entity.type | Publication | |
local.contributor.kuauthor | Eren, Özgür Can | |
local.contributor.kuauthor | Meriçöz, Çisel Aydın | |
local.contributor.kuauthor | Bulutay, Pınar | |
local.contributor.kuauthor | Baygül, Arzu Eden | |
local.contributor.kuauthor | Kulaç, İbrahim | |
local.publication.orgunit1 | SCHOOL OF MEDICINE | |
local.publication.orgunit1 | Research Center | |
local.publication.orgunit2 | KUISCID (Koç University İşbank Center for Infectious Diseases) | |
local.publication.orgunit2 | KUTTAM (Koç University Research Center for Translational Medicine) | |
local.publication.orgunit2 | School of Medicine | |
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