Publication:
Transcriptional regulation of the ADP-glucose pyrophosphorylase isoforms in the leaf and the stem under long and short photoperiod in lentil

dc.contributor.coauthorMorgil, Hande
dc.contributor.coauthorTulum, Işıl
dc.contributor.coauthorCevahir, Gül
dc.contributor.departmentDepartment of Molecular Biology and Genetics
dc.contributor.departmentDepartment of Chemical and Biological Engineering
dc.contributor.facultymemberYes
dc.contributor.kuauthorBarış, İbrahim
dc.contributor.kuauthorKavaklı, İbrahim Halil
dc.contributor.kuauthorÖzdaş, Şule Beyhan
dc.contributor.kuauthorSeferoğlu, Ayşe Bengisu
dc.contributor.schoolcollegeinstituteCollege of Engineering
dc.contributor.schoolcollegeinstituteCollege of Sciences
dc.date.accessioned2024-11-09T23:36:11Z
dc.date.issued2013
dc.description.abstractADP-glucose pyrophosphorylase (AGPase) is a key enzyme in plant starch biosynthesis. It contains large (LS) and small (SS) subunits encoded by two different genes. In this study, we explored the transcriptional regulation of both the LS and SS subunits of AGPase in stem and leaf under different photoperiods length in lentil. To this end, we first isolated and characterized different isoforms of the LS and SS of lentil AGPase and then we performed quantitative real time PCR (qPCR) to see the effect of photoperiod length on the transcription of the AGPase isforms under the different photoperiod regimes in lentil. Analysis of the qPCR results revealed that the transcription of different isoforms of the LSs and the SSs of lentil AGPase are differentially regulated when photoperiod shifted from long-day to short-day in stem and leaves. While transcript levels of LS1 and SS2 in leaf significantly decreased, overall transcript levels of SS1 increased in short-day regime. Our results indicated that day length affects the transcription of lentil AGPase isoforms differentially in stems and leaves most likely to supply carbon from the stem to other tissues to regulate carbon metabolism under short-day conditions.
dc.description.fulltextNo
dc.description.harvestedfromManual
dc.description.indexedbyWOS
dc.description.indexedbyScopus
dc.description.indexedbyPubMed
dc.description.openaccessNO
dc.description.peerreviewstatusN/A
dc.description.publisherscopeInternational
dc.description.readpublishN/A
dc.description.sponsoredbyTubitakEuTÜBİTAK
dc.description.sponsorshipTUBITAK-TOVAG [1040383]
dc.description.sponsorshipTUBA-GEBIP
dc.description.sponsorshipTUBITAK-BIDEP [2211]
dc.description.sponsorshipIstanbul University BAP project [21960] IHK would like to thanks to TUBITAK-TOVAG 1040383 and TUBA-GEBIP for their financial supports. ABS thanks to TUBITAK-BIDEP 2211 for doctoral scholarship. IHK and GC thanks Istanbul University BAP project 21960 for their financial support. We would like to thanks anonymous reviewers for their useful comments to increase clarity of the manuscript.
dc.description.studentonlypublicationNo
dc.description.studentpublicationYes
dc.description.versionN/A
dc.identifier.WoSQuartileQ1
dc.identifier.doi10.1016/j.plantsci.2013.01.006
dc.identifier.eissn1873-2259
dc.identifier.embargoN/A
dc.identifier.endpage37
dc.identifier.grantno1040383
dc.identifier.issn0168-9452
dc.identifier.pubmed23498860
dc.identifier.scopus2-s2.0-84874414663
dc.identifier.startpage29
dc.identifier.urihttps://doi.org/10.1016/j.plantsci.2013.01.006
dc.identifier.urihttps://hdl.handle.net/20.500.14288/12610
dc.identifier.volume205
dc.identifier.wos000317164800005
dc.keywordsADP-glucose pyrophosphorylase
dc.keywordsStarch biosynthesis
dc.keywordsLentil
dc.keywordsReal time-PCR
dc.keywordsLong and short photoperiod
dc.keywordsCarbon metabolism
dc.keywordsIsoforms
dc.language.isoeng
dc.publisherElsevier Ireland Ltd
dc.relation.affiliationKoç University
dc.relation.collectionKoç University Institutional Repository
dc.relation.ispartofPlant Science
dc.relation.openaccessN/A
dc.rightsN/A
dc.subjectPlant molecular biology
dc.subjectLentil gene expression
dc.subjectAGPase isoform regulation
dc.subjectPhotoperiod starch biosynthesis
dc.titleTranscriptional regulation of the ADP-glucose pyrophosphorylase isoforms in the leaf and the stem under long and short photoperiod in lentil
dc.typeJournal Article
dspace.entity.typePublication
local.contributor.kuauthorSeferoğlu, Ayşe Bengisu
local.contributor.kuauthorBarış, İbrahim
local.contributor.kuauthorÖzdaş, Şule Beyhan
local.contributor.kuauthorKavaklı, İbrahim Halil
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