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Permanent URI for this collectionhttps://hdl.handle.net/20.500.14288/6

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    PublicationOpen Access
    Enhanced sinterability, thermal conductivity and dielectric constant of glass-ceramics with PVA and BN additions
    (Multidisciplinary Digital Publishing Institute (MDPI), 2022) Akkasoğlu, Ufuk; Çiçek, Buğra; N/A; Department of Chemistry; Arıbuğa, Dilara; Balcı, Özge; Researcher; Department of Chemistry; Koç University AKKİM Boron-Based Materials _ High-technology Chemicals Research _ Application Center (KABAM) / Koç Üniversitesi AKKİM Bor Tabanlı Malzemeler ve İleri Teknoloji Kimyasallar Uygulama ve Araştırma Merkezi (KABAM); Graduate School of Sciences and Engineering; College of Sciences; N/A; 295531
    With the rapid development of the microelectronics industry, many efforts have been made to improve glass-ceramics' sinterability, thermal conductivity, and dielectric properties, which are essential components of electronic materials. In this study, low-alkali borosilicate glass-ceramics with PVA addition and glass-BN composites were prepared and successfully sintered at 770 degrees C. The phase composition, density, microstructure, thermal conductivity, and dielectric constant were investigated. It was shown that PVA addition contributes to the densification process of glass-ceramics (~88% relative density, with closed/open pores in the microstructure) and improves the thermal conductivity of glass material from 1.489 to 2.453 W/K.m. On the other hand, increasing BN addition improves microstructures by decreasing porosities and thus increasing relative densities. A glass-12 wt. % BN composite sample exhibited almost full densification after sintering and presented apparent and open pores of 2.6 and 0.08%, respectively. A high thermal conductivity value of 3.955 W/K.m and a low dielectric constant of 3.00 (at 5 MHz) were observed in this material. Overall, the resulting glass-ceramic samples showed dielectric constants in the range of 2.40-4.43, providing a potential candidate for various electronic applications.
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    PublicationOpen Access
    Improved superconducting properties in the Mg11B2 low activation superconductor prepared by low-temperature sintering
    (Nature Publishing Group (NPG), 2016) F. Cheng, Y.; Liu, Z. Ma; Hossain, M. S.; Department of Chemistry; Somer, Mehmet Suat; Faculty Member; Department of Chemistry; College of Sciences; 178882
    Mg11B2 has a great application prospect in the superconducting coils for fusion reactor as the “low activation superconductors”. The un-doped Mg11B2 and Cu-doped Mg11B2 bulks using 11B as a boron precursor were fabricated by low-temperature sintering in present work. It was found that the prepared Mg11B2 low activation superconductors exhibit better Jc performance than all of other Mg11B2 samples reported in previous studies. As for Cu doped Mg11B2, minor Cu addition can obviously improve the Mg11B2 grain crystallization and reduce the amount of MgO impurity. Hence, improved grain connectivity and higher Jc at low fields is obtained in Cu doped Mg11B2 samples. For un-doped samples, refined grains and more MgO impurity with proper size brought about more flux pinning centers, resulting in better Jc performance at high fields.
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    PublicationOpen Access
    HIPPIE: a new platform for ambient-pressure X-ray photoelectron spectroscopy at the MAX IV Laboratory
    (International Union of Crystallography (IUCr), 2021) Zhu, Suyun; Scardamaglia, Mattia; Kundsen, Jan; Sankari, Rami; Tarawneh, Hamed; Temperton, Robert; Pickworth, Louisa; Cavalca, Filippo; Wang, Chunlei; Tissot, Heloise; Weissenrieder, Jonas; Hagman, Benjamin; Gustafson, Johan; Lindgren, Fredrik; Kallquist, Ida; Maibach, Julia; Hahlin, Maria; Boix, Virginia; Gallo, Tamires; Rehman, Foqia; D'Acunto, Giulio; Schnadt, Joachim; Shavorskiy, Andrey; Department of Chemistry; Kaya, Sarp; Faculty Member; Department of Chemistry; College of Sciences; 116541
    HIPPIE is a soft X-ray beamline on the 3 GeV electron storage ring of the MAX IV Laboratory, equipped with a novel ambient-pressure X-ray photoelectron spectroscopy (APXPS) instrument. The endstation is dedicated to performing in situ and operando X-ray photoelectron spectroscopy experiments in the presence of a controlled gaseous atmosphere at pressures up to 30 mbar [1 mbar = 100 Pa] as well as under ultra-high-vacuum conditions. The photon energy range is 250 to 2200 eV in planar polarization and with photon fluxes >10(12) photons s(-1) (500 mA ring current) at a resolving power of greater than 10000 and up to a maximum of 32000. The endstation currently provides two sample environments: a catalysis cell and an electrochemical/liquid cell. The former allows APXPS measurements of solid samples in the presence of a gaseous atmosphere (with a mixture of up to eight gases and a vapour of a liquid) and simultaneous analysis of the inlet/outlet gas composition by online mass spectrometry. The latter is a more versatile setup primarily designed for APXPS at the solid-liquid (dip-and-pull setup) or liquid-gas (liquid microjet) interfaces under full electrochemical control, and it can also be used as an open port for ad hoc-designed non-standard APXPS experiments with different sample environments. The catalysis cell can be further equipped with an IR reflection-absorption spectrometer, allowing for simultaneous APXPS and IR spectroscopy of the samples. The endstation is set up to easily accommodate further sample environments.
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    PublicationOpen Access
    Effect of reaction solvent on hydroxyapatite synthesis in sol-gel process
    (The Royal Society, 2017) Department of Chemistry; Nazeer, Muhammad Anwaar; Yılgör, Emel; Yağcı, Mustafa Barış; Ünal, Uğur; Yılgör, İskender; PhD Student; Researcher; Researcher; Faculty Member; Faculty Member; Department of Chemistry; Koç University Surface Science and Technology Center (KUYTAM) / Koç Üniversitesi Yüzey Teknolojileri Araştırmaları Merkezi (KUYTAM); College of Sciences; Graduate School of Sciences and Engineering; N/A; 40527; N/A; N/A; 24181
    Synthesis of hydroxyapatite (HA) through sol-gel process in different solvent systems is reported. Calcium nitrate tetrahydrate (CNTH) and diammonium hydrogen phosphate (DAHP) were used as calcium and phosphorus precursors, respectively. Three different synthesis reactions were carried out by changing the solvent media, while keeping all other process parameters constant. A measure of 0.5 M aqueous DAHP solution was used in all reactions while CNTH was dissolved in distilled water, tetrahydrofuran (THF) and N, N-dimethylformamide (DMF) at a concentration of 0.5 M. Ammonia solution (28-30%) was used to maintain the pH of the reaction mixtures in the 10-12 range. All reactions were carried out at 40 +/- 2 degrees C for 4 h. Upon completion of the reactions, products were filtered, washed and calcined at 500 degrees C for 2 h. It was clearly demonstrated through various techniques that the dielectric constant and polarity of the solvent mixture strongly influence the chemical structure and morphological properties of calcium phosphate synthesized. Water-based reaction medium, with highest dielectric constant, mainly produced beta-calcium pyrophosphate (beta-CPF) with a minor amount of HA. DMF/water system yielded HA as the major phase with a very minor amount of beta-CPF. THF/water solvent system with the lowest dielectric constant resulted in the formation of pure HA.
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    PublicationOpen Access
    One-step aqueous synthesis of anionic and cationic AgInS2 quantum dots and their utility in improving the efficacy of ALA-based photodynamic therapy
    (American Chemical Society (ACS), 2022) Loizidou, Marilena; MacRobert, Alexander J.; Department of Chemistry; Acar, Havva Funda Yağcı; Hashemkhani, Mahshid; PhD Student; Department of Chemistry; College of Sciences; Graduate School of Sciences and Engineering; 178902; N/A
    Silver-indium-sulfide quantum dots (AIS QDs) have potential applications in many areas, including biomedicine. Their lack of regulated heavy metals, unlike many commercialized QDs, stands out as an advantage, but the necessity for alloyed or core-shell structures and related costly and sophisticated processes for the production of stable and high quantum yield aqueous AIS QDs are the current challenges. The present study demonstrates the one-step aqueous synthesis of simple AgInS2 QD compositions utilizing for the first time either a polyethyleneimine/2-mercaptopropionic acid (AIS-PEI/2MPA) mixture or only 2-mercaptopropionic acid (AIS-2MPA) as the stabilizing molecules, providing a AgInS2 portfolio consisting of cationic and anionic AIS QDs, respectively, and tuneable emission. Small AIS QDs with long-term stability and high quantum yields (19-23%) were achieved at a molar ratio of Ag/In/S 1/10/10 in water without any dopant or a semiconductor shell. The theranostic potential of these cationic and anionic AIS QDs was also evaluated in vitro. Non-toxic doses were determined, and fluorescence imaging potential was demonstrated. More importantly, these QDs were electrostatically loaded with zwitterionic 5-aminolevulinic acid (ALA) as a prodrug to enhance the tumor availability of ALA and to improve ALA-induced porphyrin photodynamic therapy (PDT). This is the first study investigating the influence of nanoparticle charge on ALA binding, release, and therapeutic efficacy. Surface charge was found to be more critical in cellular internalization and dark toxicity rather than drug loading and release. Both QDs provided enhanced ALA release at acidic pH but protected the prodrug at physiological pH, which is critical for tumor delivery of ALA, which suffers from low bioavailability. The PDT efficacy of the ALA-loaded AIS QDs was tested in 2D monolayers and 3D constructs of HT29 and SW480 human colon adenocarcinoma cancer cell lines. The incorporation of ALA delivery by the AIS QDs, which on their own do not cause phototoxicity, elicited significant cell death due to enhanced light-induced ROS generation and apoptotic/necrotic cell death, reducing the IC50 for ALA dramatically to about 0.1 and 0.01 mM in anionic and cationic AIS QDs, respectively. Combined with simple synthetic methods, the strong intracellular photoluminescence of AIS QDs, good biocompatibility of especially the anionic AIS QDs, and the ability to act as drug carriers for effective PDT signify that the AIS QDs, in particular AIS-2MPA, are highly promising theranostic QDs.
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    PublicationOpen Access
    Silk-hydrogel lenses for light-emitting diodes
    (Nature Publishing Group (NPG), 2017) Melikov, Rustamzhon; Press, Daniel Aaron; Kumar, Baskaran Ganesh; Dogru, Itir Bakis; Sadeghi, Sadra; Chirea, Mariana; Department of Chemistry; Department of Electrical and Electronics Engineering; Yılgör, İskender; Nizamoğlu, Sedat; Faculty Member; Faculty Member; Department of Chemistry; Department of Electrical and Electronics Engineering; College of Sciences; College of Engineering; 24181; 130295
    Today the high demand for electronics leads to massive production of waste, thus green materials based electronic devices are becoming more important for environmental protection and sustainability. The biomaterial based hydrogels are widely used in tissue engineering, but their uses in photonics are limited. In this study, silk fibroin protein in hydrogel form is explored as a bio-friendly alternative to conventional polymers for lens applications in light-emitting diodes. The concentration of silk fibroin protein and crosslinking agent had direct effects on optical properties of silk hydrogel. The spatial radiation intensity distribution was controlled via dome- and crater-type silk-hydrogel lenses. The hydrogel lens showed a light extraction efficiency over 0.95 on a warm white LED. The stability of silk hydrogel lens is enhanced approximately three-folds by using a biocompatible/biodegradable poly(ester-urethane) coating and more than three orders of magnitude by using an edible paraffin wax coating. Therefore, biomaterial lenses show promise for green optoelectronic applications.
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    PublicationOpen Access
    Protocol on synthesis and characterization of copper-doped InP/ZnSe quantum dots as ecofriendly luminescent solar concentrators with high performance and large area
    (Elsevier, 2021) Department of Electrical and Electronics Engineering; N/A; N/A; Department of Chemistry; Nizamoğlu, Sedat; Sadeghi, Sadra; Eren, Güncem Özgün; Shahzad, Mehwish; Faculty Member; PhD Student; Department of Electrical and Electronics Engineering; Department of Chemistry; College of Engineering; Graduate School of Sciences and Engineering; 130295; N/A; N/A; N/A
    Luminescent solar concentrators (LSCs) are simple and cost-effective solar energy-harvesting devices. Indium phosphide (InP)-based colloidal quantum dots (QDs) are promising QDs for efficient LSC devices due to their environmentally benign nature. One major challenge in LSC devices is reabsorption losses. To minimize the reabsorption, Stokes shift engineering is a critical process to designing the QD material. Here, we present a protocol that contains the preparation of structurally engineered copper-doped InP/ZnSe QDs and their LSC application.
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    PublicationOpen Access
    Strong light-matter interactions in Au plasmonic nanoantennas coupled with Prussian Blue Catalyst on BiVO(4) for photoelectrochemical water splitting
    (Wiley, 2020) Ghobadi, T. G. U.; Ghobadi, A.; Soydan, M. C.; Karadaş, F.; Özbay, E.; N/A; Department of Chemistry; Barzgarvishlaghi, Mahsa; Kaya, Sarp; Faculty Member; Department of Chemistry; Koç University Tüpraş Energy Center (KUTEM) / Koç Üniversitesi Tüpraş Enerji Merkezi (KÜTEM); Graduate School of Sciences and Engineering; College of Sciences; N/A; 116541
    A facial and large-scale compatible fabrication route is established, affording a high-performance heterogeneous plasmonic-based photoelectrode for water oxidation that incorporates a CoFe-Prussian blue analog (PBA) structure as the water oxidation catalytic center. For this purpose, an angled deposition of gold (Au) was used to selectively coat the tips of the bismuth vanadate (BiVO4 ) nanostructures, yielding Au-capped BiVO4 (Au-BiVO4 ). The formation of multiple size/dimension Au capping islands provides strong light-matter interactions at nanoscale dimensions. These plasmonic particles not only enhance light absorption in the bulk BiVO4 (through the excitation of Fabry-Perot (FP) modes) but also contribute to photocurrent generation through the injection of sub-band-gap hot electrons. To substantiate the activity of the photoanodes, the interfacial electron dynamics are significantly improved by using a PBA water oxidation catalyst (WOC) resulting in an Au-BiVO4 /PBA assembly. At 1.23 V (vs. RHE), the photocurrent value for a bare BiVO4 photoanode was obtained as 190 μA cm-2 , whereas it was boosted to 295 μA cm-2 and 1800 μA cm-2 for Au-BiVO4 and Au-BiVO4 /PBA, respectively. Our results suggest that this simple and facial synthetic approach paves the way for plasmonic-based solar water splitting, in which a variety of common metals and semiconductors can be employed in conjunction with catalyst designs.
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    PublicationOpen Access
    Finite-size effects in the dynamics and thermodynamics of two-dimensional Coulomb clusters
    (American Physical Society (APS), 2005) Calvo, F.; Wales, D. J.; Department of Chemistry; Yurtsever, İsmail Ersin; Faculty Member; Department of Chemistry; College of Sciences; 7129
    The dynamics and thermodynamics of melting in two-dimensional Coulomb clusters is revisited using molecular dynamics and Monte Carlo simulations. Several parameters are considered, including the Lindemann index, the largest Lyapunov exponent, and the diffusion constant. In addition to the orientational and radial melting processes, isomerizations and complex size effects are seen to occur in a very similar way to atomic and molecular clusters. The results are discussed in terms of the energy landscape represented through disconnectivity graphs, with proper attention paid to the broken ergodicity problems in simulations. Clusters bound by 1/r(3) and e(-kappa r)/r forces, and heterogeneous clusters made of singly and doubly charged species, are also studied, as well as the evolution toward larger systems.
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    PublicationOpen Access
    Broad spectrum antibacterial photodynamic and photothermal therapy achieved with indocyanine green loaded SPIONs under near infrared irradiation
    (Royal Society of Chemistry (RSC), 2020) N/A; Department of Physics; Department of Chemistry; Bilici, Kübra; Ataç, Nazlı; Muti, Abdullah; Toker, Işınsu Baylam; Doğan, Özlem; Sennaroğlu, Alphan; Can, Füsun; Acar, Havva Funda Yağcı; Researcher; PhD Student; Faculty Member; Faculty Member; Faculty Member; Department of Physics; Department of Chemistry; Koç University Surface Science and Technology Center (KUYTAM) / Koç Üniversitesi Yüzey Teknolojileri Araştırmaları Merkezi (KUYTAM); Graduate School of Sciences and Engineering; Graduate School of Health Sciences; School of Medicine; College of Sciences; N/A; N/A; N/A; N/A; 170418; 23851; 103165; 178902
    Antimicrobial photodynamic therapy (aPDT) and antimicrobial photothermal therapy (aPTT) are promising local and effective alternative therapies for antibiotic resistant bacterial infections and biofilms. A combination of nanoparticles and organic photosensitizers offers a great opportunity to combine PDT and PTT for effective eradication of both planktonic bacteria and their biofilms. In this work, photo-induced antibacterial activity of indocyanine green (ICG), 3-aminopropylsilane coated superparamagnetic iron oxide nanoparticles (APTMS@SPIONs) and ICG loaded APTMS@SPIONs was evaluated on planktonic cells and biofilms of Gram-negative (E. coli,K. pneumoniae,P. aeruginosa) and Gram-positive (S. epidermis) bacteria. A relatively low dose of ICG (25 mu g mL(-1)) and SPIONs (0.425 mu g mL(-1)nanoparticle) in combination with single, short (10 min) laser irradiation at 808 nm with a power of 1150 mW was used in this study. No dark toxicity of the agents or antibacterial effect of the laser irradiation was observed. The charge of the particles did not provide a significant difference in their penetration to Gram-negativeversusGram-positive bacterial strains or their biofilms. APTMS@SPION/laser treatment completely eliminatedP. aeruginosaand provided 7-log reduction in the colony forming unit (CFU) ofE. Coli, but was not effective on the other two bacteria. This is the first example for antibacterial phototoxicity of this nanoparticle. ICG/laser and ICG-APTMS@SPION/laser treatments provided complete killing of all planktonic cells. Successful eradication of all biofilms was achieved with ICG/laser (3.2-3.7 log reduction in CFUs) or ICG-APTMS@SPION/laser treatment (3.3-4.4 log reduction in CFUs). However, an exceptionally high, 6.5-log reduction as well as a dramatic difference between ICGversusICG/APTMS@SPION treatment was observed inK. pneumoniaebiofilms with ICG-APTMS@SPION/laser treatment. Investigation of the ROS production and increase in the local temperature of the biofilms that were subjected to phototherapy suggested a combination of aPTT and aPDT mechanisms for phototoxicity, exhibiting a synergistic effect when ICG-APTMS@SPION/laser was used. This approach opens an exciting and novel avenue in the fight against drug resistant infections by successfully utilizing the antimicrobial and antibiofilm activity of low dose FDA approved optically traceable ICG and relatively low cost clinically acceptable iron oxide nanoparticles to enable effective aPDT/aPTT combination, inducedviashort-duration laser irradiation at a near-infrared wavelength.