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Now showing 1 - 10 of 23
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    PublicationOpen Access
    3D printed microneedles for point of care biosensing applications
    (Multidisciplinary Digital Publishing Institute (MDPI), 2022) Department of Mechanical Engineering; Sarabi, Misagh Rezapour; Nakhjavani, Sattar Akbar; Taşoğlu, Savaş; Faculty Member; Department of Mechanical Engineering; Koç University Research Center for Translational Medicine (KUTTAM) / Koç Üniversitesi Translasyonel Tıp Araştırma Merkezi (KUTTAM); KU Arçelik Research Center for Creative Industries (KUAR) / KU Arçelik Yaratıcı Endüstriler Uygulama ve Araştırma Merkezi (KUAR); Koç Üniversitesi İş Bankası Yapay Zeka Uygulama ve Araştırma Merkezi (KUIS AI)/ Koç University İş Bank Artificial Intelligence Center (KUIS AI); Graduate School of Sciences and Engineering; College of Engineering; N/A; N/A; 291971
    Microneedles (MNs) are an emerging technology for user-friendly and minimally invasive injection, offering less pain and lower tissue damage in comparison to conventional needles. With their ability to extract body fluids, MNs are among the convenient candidates for developing biosensing setups, where target molecules/biomarkers are detected by the biosensor using the sample collected with the MNs. Herein, we discuss the 3D printing of microneedle arrays (MNAs) toward enabling point-of-care (POC) biosensing applications.
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    PublicationOpen Access
    A physical channel model and analysis for nanoscale molecular communications with Förster resonance energy transfer (FRET)
    (Institute of Electrical and Electronics Engineers (IEEE), 2012) Kuşcu, Murat; Akan, Özgür Barış; Faculty Member; College of Engineering
    In this study, a novel and physically realizable nanoscale communication paradigm is introduced based on a well-known phenomenon, Forster resonance energy transfer (FRET), for the first time in the literature. FRET is a nonradiative energy transfer process between fluorescent molecules based on the dipole-dipole interactions of molecules. Energy is transferred rapidly from a donor to an acceptor molecule in a close proximity such as 0 to 10 nm without radiation of a photon. Low dependence on the environmental factors, controllability of its parameters, and relatively wide transfer range make FRET a promising candidate to be used for a high-rate nanoscale communication channel. In this paper, the simplest form of the FRET-based molecular communication channel comprising a single transmitter-receiver nanomachine pair and an extended version of this channel with a relay nanomachine for long-range applications are modeled considering nanomachines as nanoscale electromechanical devices with some sensing, computing, and actuating capabilities. Furthermore, using the information theoretical approach, the capacities of these communication channels are investigated and the dependence of the capacity on some environmental and intrinsic parameters is analyzed. It is shown that the capacity can be increased by appropriately selecting the donor-acceptor pair, the medium, the intermolecular distance, and the orientation of the molecules.
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    PublicationMetadata only
    Anticorrosion efficiency of ultrasonically deposited silica coatings on titanium
    (Elsevier Science Bv, 2013) N/A; N/A; Department of Chemistry; N/A; Ertan, Fatoş Sibel; Kaş, Recep; Miko, Annamaria; Birer, Özgür; Master Student; Master Student; Teaching Faculty; Researcher; Department of Chemistry; Graduate School of Sciences and Engineering; Graduate School of Sciences and Engineering; College of Sciences; N/A; Koç University Surface Science and Technology Center (KUYTAM) / Koç Üniversitesi Yüzey Teknolojileri Araştırmaları Merkezi (KUYTAM); N/A; N/A; 163509; N/A
    We utilized high intensity ultrasound to prepare coatings of silica and organically modified silica composed of multiple layers of densely packed nanoparticles. Ultrasound was used to collide nanoparticles onto an activated titanium surface with high speed. Large areas could be homogeneously coated by this method. These coatings were characterized by spectroscopy and microscopy methods and the anticorrosion efficiency in NaCl solution was evaluated by electrochemical measurements. The results indicated that the composite coatings provided good quality barrier layer on bare titanium and decreased the anodic corrosion rate. It was found that increase in the organic content of the coating shifted the passivation potential towards more positive direction. The comparison of the impedance results recorded at the corrosion potential pointed out that in each case a good quality barrier layer was formed on the titanium surface. The outstanding corrosion resistance of the composite coatings with only similar to 200 nm thickness shows that ultrasound assisted deposition can be a competitive method to obtain corrosion protective layers. (c) 2013 Elsevier B.V. All rights reserved.
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    PublicationOpen Access
    Bistable behavior of a two-mode Bose-Einstein condensate in an optical cavity
    (Maik Nauka/Interperiodica Publishing, 2013) Safaei, S.; Tanatar, B.; Department of Physics; Müstecaplıoğlu, Özgür Esat; Faculty Member; Department of Physics; College of Sciences; 1674
    We consider a two-component Bose-Einstein condensate in a one-dimensional optical cavity. Specifically, the condensate atoms are taken to be in two degenerate modes due to their internal hyperfine spin degrees of freedom and they are coupled to the cavity field and an external transverse laser field in a Raman scheme. A parallel laser also excites the cavity mode. When the pump laser is far detuned from its resonance atomic transition frequency, an effective nonlinear optical model of the cavity-condensate system is developed under the discrete mode approximation (DMA), while matter-field coupling has been considered beyond the rotating wave approximation. By analytical and numerical solutions of the nonlinear dynamical equations, we examine the mean cavity field and population difference (magnetization) of the condensate modes. The stationary solutions of both the mean cavity field and normalized magnetization demonstrate bistable behavior under certain conditions for the laser pump intensity and matter-field coupling strength.
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    PublicationOpen Access
    Collective excitations of a laser driven atomic condensate in an optical cavity
    (Maik Nauka/Interperiodica Publishing, 2013) Öztop, B.; Türeci, H. E.; Department of Physics; Müstecaplıoğlu, Özgür Esat; Faculty Member; Department of Physics; College of Sciences; 1674
    We theoretically examine collective excitations of an optically driven atomic Bose-Einstein condensate, coupled to a high-finesse optical cavity. This open system has been recently used for the experimental demonstration of the Dicke superradiance of cavity photons, which is simultaneously and mutually triggered by spontaneous breaking of translational symmetry of the condensate into a crystalline order. We first develop a Hartree-Fock mean field dynamical model of the physical system. Using this model, we compute the dynamics of the cavity photons, the condensate density profile and the Dicke phase transition diagram. Both the imaginary-time and real-time evolution methods are used in the calculations. Collective excitations are determined by the solving Bogoliubov-de Gennes equations. The spectrum, softening of the modes and energetic hierarchy of excitations are determined.
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    PublicationOpen Access
    Droplet resonator based optofluidic microlasers
    (Society of Photo-optical Instrumentation Engineers (SPIE), 2014) Brzobohaty, Oto; Jezek, Jan; Pilat, Zdenek; Zemanek, Pavel; Anand, Suman; McGloin, David; Department of Physics; Kiraz, Alper; Aas, Mehdi; Karadağ, Yasin; Jonas, Alexandr; Faculty Member; PhD Student; Department of Physics; Graduate School of Sciences and Engineering; College of Sciences; 22542; N/A; N/A; N/A
    An SU-8 polymer microdisk resonator coated with a palladium (Pd) layer and coupled to a single-mode optical waveguide is used to as a hydrogen (H-2) gas sensor. In the presence of H2 a red shift is observed in the spectral positions of the microdisk whispering gallery modes (WGMs) due to the expansion in the Pd lattice. H-2 concentrations below the flammable limit (4%) down to 0.3% could be detected in nitrogen atmosphere at room temperature. For H-2 concentrations between 0.3 1%, WGM spectral positions shifted linearly with H-2 concentration at a rate of 32 pm/%H-2. Average response time of the devices was measured to be 50 s for 1% H-2. The proposed device concept can also be used to detect different chemical gases by using appropriate sensing layers.
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    Dynamic modeling of soft magnetic film actuated scanners
    (IEEE-Inst Electrical Electronics Engineers Inc, 2009) N/A; N/A; Department of Electrical and Electronics Engineering; Işıkman, Serhan Ömer; Ürey, Hakan; Master Student; Faculty Member; Department of Electrical and Electronics Engineering; Graduate School of Sciences and Engineering; College of Engineering; N/A; 8579
    Dynamic behavior of magnetic thin film actuators is investigated in detail and applied to various laser scanning applications. Magnetic hysteresis effects are incorporated into the model developed in the prior work, which assumes linear magnetization as a function of magnetic field and is based on the distributed point-by-point calculation of the magnetostatic moments and forces across the film surface. A simple functional form is used to model the major B-H loop of ferromagnetic films. The model is validated with permalloy (Ni-Fe) plated polymer actuators. The actuators are excited using an external electro-coil and the structures deflect due to magnetic anisotropy torque. The ac deflection of the actuators is modeled by calculating the point-by-point moments on the magnetic film and the solution can handle nonuniform external field and unsaturated magnetic film cases. A 25 degrees optical scan angle is demonstrated for laser scanning display and imaging applications with a nonoptimum coil. Scaling the model to MEMS devices is also discussed.
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    PublicationMetadata only
    Energy-efficient data transmission for capacitive-coupled human body communication systems
    (Ieee-Inst Electrical Electronics Engineers Inc, 2021) Filipovic, Luka; Herceg, Marijan; Vlaovic, Jelena; Department of Electrical and Electronics Engineering; Başar, Ertuğrul; Faculty Member; Department of Electrical and Electronics Engineering; College of Engineering; 149116
    In this letter, an energy-efficient and low-complexity method for capacitive-coupled human body communication (CC-HBC) systems is proposed. In the proposed method, called impedance shift keying CC-HBC, the change of impedance between the transmitter's signal and the ground electrode is used to map information. In particular, the transmitter changes the condition of an electrical field generated by the receiver by changing the impedance between its signal and ground electrodes. Subsequently, by detecting the changes in the electric field, the receiver can demodulate the information sent by the transmitter. The CC-HBC channel is obtained using the transfer function method, while the performance of the proposed scheme is compared with frequency shift keying and on-off keying modulations.
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    PublicationOpen Access
    Field-effect active plasmonics for ultracompact electro-optic switching
    (American Institute of Physics (AIP) Publishing, 2012) Çetin, Arif E.; Yanık, Ahmet A.; Mertiri, Alket; Erramilli, Shyamsunder; Altuğ, Hatice; Department of Physics; Müstecaplıoğlu, Özgür Esat; Faculty Member; Department of Physics; College of Sciences; 1674
    Merging of electronics and photonics at subwavelength dimensions could potentially allow development of ultracompact electro-optic modulators and active optical interconnects. Here, we introduce a field-effect active plasmonic modulator where the metallic ring serves as both a photonic resonator and a field electrode. By exploiting the simultaneous electronic and photonic functionalities of our plasmonic device, we show devices offering significantly improved modulation depths (as high as similar to 10.85 dB) compared to active dielectric micro-ring resonators. Device concepts introduced in this work are applicable in realization of various integrated components and could play an important role in development of active plasmonic circuits. 
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    PublicationOpen Access
    Free-standing optofluidic waveguides formed on patterned superhydrophobic surfaces
    (American Institute of Physics (AIP) Publishing, 2014) Yalızay, Berna; Aktürk, Selçuk; Department of Physics; Jonas, Alexandr; Kiraz, Alper; Faculty Member; Department of Physics; College of Sciences; N/A; 22542
    We report on the preparation and characterization of free-standing optofluidic waveguides created on solid superhydrophobic (SH) substrates with patterned wetting properties. In order to locally modify the liquid-solid contact angle, we employed selective laser ablation of SH layers deposited on magnesium-fluoride substrates with low refractive index. Upon ablation, surfaces with hydrophilic channels surrounded by SH areas were obtained. Subsequently, we created liquid optical waveguides based on total internal reflection using ethylene glycol, a polar liquid with high refractive index spreading spontaneously along the hydrophilic surface channels. We evaluated the light guiding performance and losses of these optofluidic waveguides. (C) 2014 AIP Publishing LLC.