Researcher: Sevgin, Börteçine
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Sevgin, Börteçine
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Publication Metadata only Left atrial ligation in the avian embryo as a model for altered hemodynamic loading during early vascular development(Journal of Visualized Experiments, 2023) Department of Mechanical Engineering; Department of Mechanical Engineering; Sevgin, Börteçine; Çoban, Merve Nur; Karataş, Faruk; Pekkan, Kerem; Graduate School of Sciences and Engineering; College of EngineeringDue to its four-chambered mature ventricular configuration, ease of culture, imaging access, and efficiency, the avian embryo is a preferred vertebrate animal model for studying cardiovascular development. Studies aiming to understand the normal development and congenital heart defect prognosis widely adopt this model. Microscopic surgical techniques are introduced to alter the normal mechanical loading patterns at a specific embryonic time point and track the downstream molecular and genetic cascade. The most common mechanical interventions are left vitelline vein ligation, conotruncal banding, and left atrial ligation (LAL), modulating the intramural vascular pressure and wall shear stress due to blood flow. LAL, particularly if performed in ovo, is the most challenging intervention, with very small sample yields due to the extremely fine sequential microsurgical operations. Despite its high risk, in ovo LAL is very valuable scientifically as it mimics hypoplastic left heart syndrome (HLHS) pathogenesis. HLHS is a clinically relevant, complex congenital heart disease observed in human newborns. A detailed protocol for in ovo LAL is documented in this paper. Briefly, fertilized avian embryos were incubated at 37.5 degrees C and 60% constant humidity typically until they reached Hamburger-Hamilton (HH) stages 20 to 21. The egg shells were cracked open, and the outer and inner membranes were removed. The embryo was gently rotated to expose the left atrial bulb of the common atrium. Pre-assembled micro-knots from 10-0 nylon sutures were gently positioned and tied around the left atrial bud. Finally, the embryo was returned to its original position, and LAL was completed. Normal and LALinstrumented ventricles demonstrated statistically significant differences in tissue compaction. An efficient LAL model generation pipeline would contribute to studies focusing on synchronized mechanical and genetic manipulation during the embryonic development of cardiovascular components. Likewise, this model will provide a perturbed cell source for tissue culture research and vascular biology.Publication Metadata only Modulation of mechanosensitive genes during embryonic aortic arch development(WILEY, 2024) Golcez, Tansu; Celik, Merve; Suder, Ilke; Ozoren, Nesrin; Department of Mechanical Engineering; Department of Mechanical Engineering; Siddiqui, Hummaira Banu; Köse, Tansu Gölcez; Pekkan, Kerem; Çoban, Mervenur; Sevgin, Börteçine; Graduate School of Sciences and Engineering; College of EngineeringBackgroundEarly embryonic aortic arches (AA) are a dynamic vascular structures that are in the process of shaping into the great arteries of cardiovascular system. Previously, a time-lapsed mechanosensitive gene expression map was established for AA subject to altered mechanical loads in the avian embryo. To validate this map, we investigated effects on vascular microstructure and material properties following the perturbation of key genes using an in-house microvascular gene knockdown system.ResultsAll siRNA vectors show a decrease in the expression intensity of desired genes with no significant differences between vectors. In TGF beta 3 knockdowns, we found a reduction in expression intensities of TGF beta 3 (<= 76%) and its downstream targets such as ELN (<= 99.6%), Fbn1 (<= 60%), COL1 (<= 52%) and COL3 (<= 86%) and an increase of diameter in the left AA (23%). MMP2 knockdown also reduced expression levels in MMP2 (<= 30%) and a 6-fold increase in its downstream target COL3 with a decrease in stiffness of the AA wall and an increase in the diameter of the AA (55%). These in vivo measurements were confirmed using immunohistochemistry, western blotting and a computational growth model of the vascular extracellular matrix (ECM).ConclusionsLocalized spatial genetic modification of the aortic arch region governs the vascular phenotype and ECM composition of the embryo and can be integrated with mechanically-induced congenital heart disease models.Publication Metadata only Myocardial biomechanics and the consequent differentially expressed genes of the left atrial ligation chick embryonic model of hypoplastic left heart syndrome(Springer, 2023) Chan, Wei Xuan; Motakis, Efthymios; Ho, Sheldon; Yap, Choon Hwai; Lashkarinia, S. Samaneh; Department of Mechanical Engineering; Department of Mechanical Engineering; Siddiqui, Hummaira Banu; Çoban, Mervenur; Sevgin, Börteçine; Pekkan, Kerem; College of Engineering; Graduate School of Sciences and EngineeringLeft atrial ligation (LAL) of the chick embryonic heart is a model of the hypoplastic left heart syndrome (HLHS) where a purely mechanical intervention without genetic or pharmacological manipulation is employed to initiate cardiac malformation. It is thus a key model for understanding the biomechanical origins of HLHS. However, its myocardial mechanics and subsequent gene expressions are not well-understood. We performed finite element (FE) modeling and single-cell RNA sequencing to address this. 4D high-frequency ultrasound imaging of chick embryonic hearts at HH25 (ED 4.5) were obtained for both LAL and control. Motion tracking was performed to quantify strains. Image-based FE modeling was conducted, using the direction of the smallest strain eigenvector as the orientations of contractions, the Guccione active tension model and a Fung-type transversely isotropic passive stiffness model that was determined via micro-pipette aspiration. Single-cell RNA sequencing of left ventricle (LV) heart tissues was performed for normal and LAL embryos at HH30 (ED 6.5) and differentially expressed genes (DEG) were identified.After LAL, LV thickness increased by 33%, strains in the myofiber direction increased by 42%, while stresses in the myofiber direction decreased by 50%. These were likely related to the reduction in ventricular preload and underloading of the LV due to LAL. RNA-seq data revealed potentially related DEG in myocytes, including mechano-sensing genes (Cadherins, NOTCH1, etc.), myosin contractility genes (MLCK, MLCP, etc.), calcium signaling genes (PI3K, PMCA, etc.), and genes related to fibrosis and fibroelastosis (TGF-beta, BMP, etc.). We elucidated the changes to the myocardial biomechanics brought by LAL and the corresponding changes to myocyte gene expressions. These data may be useful in identifying the mechanobiological pathways of HLHS.