Researcher: Ingman, Tara
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Ingman, Tara
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Publication Open Access Human mobility at Tell Atchana (Alalakh), Hatay, Turkey during the 2nd millennium BC: integration of isotopic and genomic evidence(Public Library of Science, 2021) Eisenmann, S.; Skourtanioti, E.; Akar, M.; Ilgner, J.; Gnecchi Ruscone, G. A.; le Roux, P.; Shafiq, R.; Neumann, G. U.; Keller, M.; Freund, C.; Marzo, S.; Lucas, M.; Krause, J.; Roberts, P.; Yener, K. A.; Stockhammer, P. W.; Ingman, Tara; Researcher; Koç University Research Center for Anatolian Civilizations (ANAMED) / Anadolu Medeniyetleri Araştırma Merkezi (ANAMED)The Middle and Late Bronze Age, a period roughly spanning the 2(nd) millennium BC (ca. 2000-1200 BC) in the Near East, is frequently referred to as the first 'international age', characterized by intense and far-reaching contacts between different entities from the eastern Mediterranean to the Near East and beyond. In a large-scale tandem study of stable isotopes and ancient DNA of individuals excavated at Tell Atchana (Alalakh, located in Hatay, Turkey), we explored the role of mobility at the capital of a regional kingdom, named Mukish during the Late Bronze Age, which spanned the Amuq Valley and some areas beyond. We generated strontium and oxygen isotope data from dental enamel for 53 individuals and 77 individuals, respectively, and added ancient DNA data of 10 newly sequenced individuals to a dataset of 27 individuals published in 2020. Additionally, we improved the DNA coverage of one individual from this 2020 dataset. The DNA data revealed a very homogeneous gene pool. This picture of an overwhelmingly local ancestry was consistent with the evidence of local upbringing in most of the individuals indicated by the isotopic data, where only five were found to be non-local. High levels of contact, trade, and exchange of ideas and goods in the Middle and Late Bronze Ages, therefore, seem not to have translated into high levels of individual mobility detectable at Tell Atchana.Publication Open Access Archaeometric evidence for the earliest exploitation of lignite from the bronze age Eastern Mediterranean(Nature Publishing Group (NPG), 2021) Buckley, Stephen; Power, Robert C.; Andreadaki-Vlazaki, Maria; Akar, Murat; Becher, Julia; Belser, Matthias; Cafisso, Sara; Eisenmann, Stefanie; Fletcher, Joann; Francken, Michael; Hallager, Birgitta; Harvati, Katerina; Kataki, Efthymia; Maran, Joseph; Martin, Mario A. S.; McGeorge, Photini J. P.; Milevski, Ianir; Papadimitriou, Alkestis; Protopapadaki, Eftychia; Salazar-Garcia, Domingo C.; Schmidt-Schultz, Tyede; Schuenemann, Verena J.; Shafiq, Rula; Stuijts, Ingelise; Yegorov, Dmitry; Yener, K. Aslıhan; Schultz, Michael; Spiteri, Cynthianne; Stockhammer, Philipp W.; Ingman, Tara; Researcher; Koç University Research Center for Anatolian Civilizations (ANAMED) / Anadolu Medeniyetleri Araştırma Merkezi (ANAMED)This paper presents the earliest evidence for the exploitation of lignite (brown coal) in Europe and sheds new light on the use of combustion fuel sources in the 2nd millennium BCE Eastern Mediterranean. We applied Thermal Desorption/Pyrolysis-Gas Chromatography-Mass Spectrometry and Polarizing Microscopy to the dental calculus of 67 individuals and we identified clear evidence for combustion markers embedded within this calculus. In contrast to the scant evidence for combustion markers within the calculus samples from Egypt, all other individuals show the inhalation of smoke from fires burning wood identified as Pinaceae, in addition to hardwood, such as oak and olive, and/or dung. Importantly, individuals from the Palatial Period at the Mycenaean citadel of Tiryns and the Cretan harbour site of Chania also show the inhalation of fire-smoke from lignite, consistent with the chemical signature of sources in the northwestern Peloponnese and Western Crete respectively. This first evidence for lignite exploitation was likely connected to and at the same time enabled Late Bronze Age Aegean metal and pottery production, significantly by both male and female individuals.Publication Open Access Ten millennia of hepatitis B virus evolution(American Association for the Advancement of Science (AAAS), 2021) Kocher, A.; Papac, L.; Barquera, R.; Key, FM.; Spyrou, MA.; Hubler, R.; Rohrlach, AB.; Aron, F.; Stahl, R.; Wissgott, A.; van Bommel, F.; Pfefferkorn, M.; Mittnik, A.; Villalba-Mouco, V.; Neumann, GU.; Rivollat, M.; van de Loosdrecht, MS.; Majander, K.; Tukhbatova, RI.; Musralina, L.; Ghalichi, A.; Penske, S.; Sabin, S.; Michel, M.; Gretzinger, J.; Nelson, EA.; Ferraz, T.; Nagele, K.; Parker, C.; Keller, M.; Guevara, EK.; Feldman, M.; Eisenmann, S.; Skourtanioti, E.; Giffin, K.; Gnecchi-Ruscone, GA.; Friederich, S.; Schimmenti, V.; Khartanovich, V.; Karapetian, MK.; Chaplygin, MS.; Kufterin, VV.; Khokhlov, AA.; Chizhevsky, AA.; Stashenkov, DA.; Kochkina, AF.; Tejedor-Rodriguez, C.; de Lagran, IGM.; Arcusa-Magallon, H.; Garrido-Pena, R.; Royo-Guillen, JI.; Novacek, J.; Rottier, S.; Kacki, S.; Saintot, S.; Kaverzneva, E.; Belinskiy, AB.; Veleminsky, P.; Limbursky, P.; Kostka, M.; Loe, L.; Popescu, E.; Clarke, R.; Lyons, A.; Mortimer, R.; Sajantila, A.; de Armas, YC.; Godoy, STH.; Hernandez-Zaragoza, DI.; Pearson, J.; Binder, D.; Lefranc, P.; Kantorovich, AR.; Maslov, VE.; Lai, L.; Zoledziewska, M.; Beckett, JF.; Langova, M.; Atienzar, GG.; Ibanez, MPD; Romero, A.; Sperduti, A.; Beckett, S.; Salter, SJ.; Zilivinskaya, ED.; Vasil, DV.; von Heyking, K.; Burger, RL.; Salazar, LC.; Amkreutz, L.; Navruzbekov, M.; Rosenstock, E.; Alonso-Fernandez, C.; Slavchev, V.; Kalmykov, AA.; Atabiev, BC.; Batieva, E; Calmet, MA.; Llamas, B.; Schultz, M.; Krauss, R.; Jimenez-Echevarria, J.; Francken, M.; Shnaider, S.; de Knijff, P.; Altena, E.; Van de Vijver, K.; Fehren-Schmitz, L.; Tung, TA.; Losch, S.; Dobrovolskaya, M.; Makarov, N.; Read, C.; Van Twest, M.; Sagona, C.; Ramsl, PC.; Akar, M.; Yener, KA.; Ballestero, EC.; Cucca, F.; Mazzarello, V.; Utrilla, P.; Rademaker, K.; Fernandez-Dominguez, E.; Baird, D.; Semal, P.; Marquez-Morfin, L; Roksandic, M.; Steiner, H.; Salazar-Garcia, DC.; Shishlina, N. Erdal, YS.; Hallgren, F.; Boyadzhiev, Y.; Boyadzhiev, K.; Kussner, M.; Sayer, D.; Onkamo, P.; Skeates, R.; Rojo-Guerra, M.; Buzhilova, A.; Khussainova, E.; Djansugurova, LB.; Beisenov, AZ.; Samashev, Z.; Massy, K.; Mannino, M.; Moiseyev, V.; Mannermaa, K.; Balanovsky, O.; Deguilloux, MF.; Reinhold, S.; Hansen, S.; Kitov, EP.; Dobes, M.; Ernee, M.; Meller, H.; Prufer, Kay.; Warinner, C.; Schiffels, S.; Stockhammer, PW.; Bos, K.; Posth, C.; Herbig, A.; Haak, W.; Krause, J.; Kuhnert, D.; Ingman, Tara; Researcher; Koç University Research Center for Anatolian Civilizations (ANAMED) / Anadolu Medeniyetleri Araştırma Merkezi (ANAMED)Hepatitis B virus (HBV) has been infecting humans for millennia and remains a global health problem, but its past diversity and dispersal routes are largely unknown. We generated HBV genomic data from 137 Eurasians and Native Americans dated between ~10,500 and ~400 years ago. We date the most recent common ancestor of all HBV lineages to between ~20,000 and 12,000 years ago, with the virus present in European and South American hunter-gatherers during the early Holocene. After the European Neolithic transition, Mesolithic HBV strains were replaced by a lineage likely disseminated by early farmers that prevailed throughout western Eurasia for ~4000 years, declining around the end of the 2nd millennium BCE. The only remnant of this prehistoric HBV diversity is the rare genotype G, which appears to have reemerged during the HIV pandemic.