Researcher:
Khokkar, Moaaz Ur-Rehman

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Master Student

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Moaaz Ur-Rehman

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Khokkar

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Khokkar, Moaaz Ur-Rehman

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    Publication
    PPInterface: a comprehensive dataset of 3D protein-protein interface structures
    (Academic Press, 2024) Department of Computer Engineering;Department of Chemical and Biological Engineering; Abalı, Zeynep; Aydın, Zeynep; Khokkar, Moaaz Ur-Rehman; Gürsoy, Attila; Keskin, Özlem; Graduate School of Sciences and Engineering; College of Engineering
    The PPInterface dataset contains 815,082 interface structures, providing the most comprehensive structural information on protein–protein interfaces. This resource is extracted from over 215,000 three-dimensional protein structures stored in the Protein Data Bank (PDB). The dataset contains a wide range of protein complexes, providing a wealth of information for researchers investigating the structural properties of protein–protein interactions. The accompanying web server has a user-friendly interface that allows for efficient search and download functions. Researchers can access detailed information on protein interface structures, visualize them, and explore a variety of features, increasing the dataset's utility and accessibility.