Publication:
Design and instrumentation of an opto-digital confocal microscope

dc.conference.dateNOV 24-DEC 26, 2017
dc.conference.locationIstanbul, TURKEY
dc.conference.organizer21st National Biomedical Engineering Meeting (BIYOMUT)
dc.contributor.coauthorKurt, Adnan
dc.contributor.coauthorKiraz, Berna
dc.contributor.departmentDepartment of Physics
dc.contributor.facultymemberYes
dc.contributor.kuauthorKiraz, Alper
dc.contributor.kuauthorZengin, Berk
dc.contributor.schoolcollegeinstituteCollege of Sciences
dc.date.accessioned2024-11-09T22:48:55Z
dc.date.issued2018
dc.description.abstractConfocal microscopy has become a vital technique for life sciences due to higher lateral and axial resolution it provides compared to standard epifluorescence microscopy. On the contrary, accessibility to confocal microscopes did not escalate in proportion to its usage around the globe. Therefore, it was aimed to build an opto-digital confocal microscope, eventually leading to a product which will be affordable for research groups, institutes and hospitals. In this work, we present a home-built confocal microscopy setlp using commercially available equipment. The design of the setup was realized using a 488 nm laser, an inverted microscope and optical/optomechanical parts including mirrors, lenses, beam splitter, scan lens. In addition, X-Y galvo scanner was controlled by using a custom-built control electronics. Instrumentation was made using a National Instruments DAQ card and LabVIEW based software. For characterization purposes reference samples were successfully imaged, following imaging of biological specimen. Gained know-how during development and prototyping will contribute vastly to process of producing a robust, desktop, easy to use and affordable confocal microsocope for researchers and organizations at a diverse scale.
dc.description.fulltextNo
dc.description.harvestedfromManual
dc.description.indexedbyWOS
dc.description.indexedbyScopus
dc.description.openaccessYES
dc.description.peerreviewstatusN/A
dc.description.publisherscopeInternational
dc.description.readpublishN/A
dc.description.sponsoredbyTubitakEuTÜBİTAK
dc.description.sponsorshipBu çalışma 113F172 kodlu TÜBİTAK projesi tarafından desteklenmiştir
dc.description.studentonlypublicationNo
dc.description.studentpublicationYes
dc.description.versionN/A
dc.identifier.WoSQuartileN/A
dc.identifier.doi10.1109/BIYOMUT.2017.8479073
dc.identifier.embargoN/A
dc.identifier.grantno113F172
dc.identifier.isbn9781538653401
dc.identifier.scopus2-s2.0-85056428216
dc.identifier.urihttps://doi.org/10.1109/BIYOMUT.2017.8479073
dc.identifier.urihttps://hdl.handle.net/20.500.14288/6421
dc.identifier.wos000447671500037
dc.keywordsBiomedical engineering
dc.keywordsComputer programming languages
dc.keywordsConfocal microscopy
dc.keywordsLaser mirrors
dc.keywordsLenses
dc.keywordsOptical beam splitters
dc.keywordsTechnology transfer
dc.keywordsAxial resolutions
dc.keywordsBiological specimens
dc.keywordsConfocal microscopes
dc.keywordsControl electronics
dc.keywordsEpifluorescence microscopy
dc.keywordsNational Instruments
dc.keywordsReference samples
dc.keywordsResearch groups
dc.keywordsMicroscopes
dc.language.isotur
dc.publisherInstitute of Electrical and Electronics Engineers
dc.relation.affiliationKoç University
dc.relation.collectionKoç University Institutional Repository
dc.relation.ispartof2017 21st National Biomedical Engineering Meeting, BIYOMUT 2017
dc.relation.openaccessN/A
dc.rightsN/A
dc.subjectEngineering
dc.subjectBiomedical engineering
dc.subjectPhysics
dc.titleDesign and instrumentation of an opto-digital confocal microscope
dc.typeConference Proceeding
dspace.entity.typePublication
local.contributor.kuauthorZengin, Berk
local.contributor.kuauthorKiraz, Alper
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