Publication:
Systematic design and evaluation of aptamers for VEGF and PlGF biomarkers of preeclampsia

dc.contributor.departmentDepartment of Mechanical Engineering
dc.contributor.departmentGraduate School of Sciences and Engineering
dc.contributor.kuauthorBeker, Levent
dc.contributor.kuauthorCebecioğlu, Rümeysa Emine
dc.contributor.schoolcollegeinstituteCollege of Engineering
dc.contributor.schoolcollegeinstituteGRADUATE SCHOOL OF SCIENCES AND ENGINEERING
dc.date.accessioned2025-03-06T20:57:41Z
dc.date.issued2024
dc.description.abstractPreeclampsia is a potentially life-threatening condition for both mother and baby, characterized by hypertension and potential organ damage. Early diagnosis is crucial to mitigate its adverse health effects. Traditional diagnostic methods, which focus on late-manifesting symptoms like hypertension and proteinuria, underscore the need for molecular diagnostic approaches for timely detection. This study successfully designs and evaluates novel aptamers with high specificity and affinity for Vascular Endothelial Growth Factor (VEGF) and Placental Growth Factor (PlGF), biomarkers closely associated with preeclampsia. Using molecular docking, molecular dynamics simulations, and BioLayer Interferometry (BLI), we identified aptamers that demonstrated strong binding affinities, comparable or superior to traditional antibodies. Our findings suggest that these aptamers have the potential to be integrated into cost-effective, point-of-care diagnostic tools, significantly improving early detection and intervention strategies for preeclampsia. The robust performance of these aptamers marks a pivotal step toward the development of more reliable and accessible diagnostic solutions, with implications for better maternal and fetal health outcomes.
dc.description.indexedbyWOS
dc.description.indexedbyScopus
dc.description.indexedbyPubMed
dc.description.publisherscopeInternational
dc.description.sponsoredbyTubitakEuN/A
dc.description.sponsorshipH.C.K. acknowledges the financial support of the Department of Biomedical Engineering of the College of Engineering of Texas AandM University, the Center for Remote Health Technologies and Systems of Texas AandM Engineering Experiment Station, the National Science Foundation-funded ERC Center PATHS-UP, and the Department of Defense Office of Naval Research (Award No. N00014-23-1-2225). M.A. acknowledges the support provided by Majmaah University (MU) through the Saudi Arabian Cultural Mission (SACM). S.M. acknowledges the High-Performance Research Computing Center (HPRC) of Texas AandM University for the computational resources. L.B. acknowledges the European Research Council (2ND-CHANCE, Grant no. 101043119).
dc.identifier.doi10.1186/s12896-024-00891-0
dc.identifier.eissn1472-6750
dc.identifier.grantnoNational Science Foundation;Department of Biomedical Engineering of the College of Engineering of Texas AM University;Center for Remote Health Technologies and Systems of Texas AandM Engineering Experiment Station;National Science Foundation-funded ERC Center PATHS-UP [N00014-23-1-2225];Department of Defense Office of Naval Research;Majmaah University (MU) through the Saudi Arabian Cultural Mission (SACM) [2ND-CHANCE, 101043119];European Research Council
dc.identifier.issue1
dc.identifier.quartileQ2
dc.identifier.scopus2-s2.0-85205335889
dc.identifier.urihttps://doi.org/10.1186/s12896-024-00891-0
dc.identifier.urihttps://hdl.handle.net/20.500.14288/27274
dc.identifier.volume24
dc.identifier.wos1325064900005
dc.keywordsPreeclampsia
dc.keywordsVegf
dc.keywordsPlgf
dc.keywordsAptamer
dc.keywordsDiagnostics
dc.keywordsAptasensor
dc.keywordsBio-layer interferometry
dc.keywordsMolecular docking
dc.keywordsAptamer design
dc.keywordsBiomarker
dc.language.isoeng
dc.publisherBMC
dc.relation.ispartofBMC BIOTECHNOLOGY
dc.subjectBiotechnology and applied microbiology
dc.titleSystematic design and evaluation of aptamers for VEGF and PlGF biomarkers of preeclampsia
dc.typeJournal Article
dspace.entity.typePublication
local.contributor.kuauthorBeker, Levent
local.contributor.kuauthorCebecioğlu, Rümeysa Emine
local.publication.orgunit1College of Engineering
local.publication.orgunit1GRADUATE SCHOOL OF SCIENCES AND ENGINEERING
local.publication.orgunit2Department of Mechanical Engineering
local.publication.orgunit2Graduate School of Sciences and Engineering
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