Publication:
Development and evaluation of a 3D-engineered neural co-culture system: impacts on oxidative stress, pentose phosphate pathway, trace element and mineral metabolisms

dc.contributor.coauthorPolat, İrem
dc.contributor.departmentGraduate School of Health Sciences
dc.contributor.departmentKUTTAM (Koç University Research Center for Translational Medicine)
dc.contributor.departmentSchool of Medicine
dc.contributor.kuauthorAydemir, Duygu
dc.contributor.kuauthorKeleş, Buse
dc.contributor.kuauthorMetin, Ecem
dc.contributor.kuauthorSokullu, Emel
dc.contributor.kuauthorUlusu, Nuriye Nuray
dc.contributor.schoolcollegeinstituteGRADUATE SCHOOL OF HEALTH SCIENCES
dc.contributor.schoolcollegeinstituteResearch Center
dc.contributor.schoolcollegeinstituteSCHOOL OF MEDICINE
dc.date.accessioned2025-12-31T08:20:21Z
dc.date.available2025-12-31
dc.date.issued2026
dc.description.abstractBackground Co-culturing multiple cell types within three-dimensional (3D) systems enhances the capacity to investigate intricate cell-cell and cell-microenvironment interactions, offering deeper insights into multicellular dynamics. This study comprehensively investigates the role of cellular metabolism within 3D cell culture models, offering a detailed examination of the underlying metabolic processes. New method In this study, a three-dimensional co-culture system was developed by encapsulating human neuroblastoma (SH-SY5Y) and human umbilical vein endothelial (HUVEC) cells within photopolymerized gelatin methacrylate (GelMA) hydrogels using photomasks for studying multiplex neural co-cultures. The structural characteristics of the hydrogel were analyzed using Fourier-transform infrared spectroscopy (FTIR) and scanning electron microscopy (SEM). Cell proliferation and antioxidant enzyme activities, including glucose 6-phosphate dehydrogenase (G6PD), 6-phosphoglucanate dehydrogenase (6-PGD), glutathione reductase (GR), glutathione s-transferase (GST), and glutathione peroxidase (GPx) were measured. The levels of trace elements and minerals were also quantified. Results The 3D-co-culture system can be considered non-toxic based on ISO 10993–5 since cell viability did not reduce below 80 % on the 7th day compared to day 0. The 3D model did not adversely affect the indicated enzymes in the co-culture system for up to 7 days. Na, Ca, Cu, Zn, and Mg levels significantly increased in the first, 4th, and 7th days compared to day 0. Comparison with existing methods Although photomask-based patterning of GelMA scaffolds has been previously demonstrated, our approach is unique as it combines multiplex photomask fabrication with the co-culture of neuronal and endothelial cells. Additionally, we measure multiple metabolic pathways, including the pentose phosphate pathway (PPP) and antioxidant enzymes, as well as the dynamics of trace and mineral elements in spatially defined neurovascular co-cultures. This integration allows for the simultaneous production of numerous geometrically controlled replicates and provides the first comprehensive assessment of PPP activity alongside trace element dynamics in engineered neural co-cultures. Conclusion This study highlights the benefits of using GelMA-based constructs in supporting viable and metabolically active cells in a 3D environment and presents a robust framework of methodologies that can be employed in future research to elucidate the complex metabolic dynamics in 3D environments, in tissue engineering, disease modeling, and drug development.
dc.description.fulltextYes
dc.description.harvestedfromManual
dc.description.indexedbyWOS
dc.description.indexedbyScopus
dc.description.indexedbyPubMed
dc.description.publisherscopeInternational
dc.description.readpublishN/A
dc.description.sponsoredbyTubitakEuN/A
dc.description.sponsorshipKoç Üniversitesi, KU
dc.identifier.doi10.1016/j.jneumeth.2025.110614
dc.identifier.embargoNo
dc.identifier.issn0165-0270
dc.identifier.pubmed41176241
dc.identifier.quartileQ3
dc.identifier.scopus2-s2.0-105020985004
dc.identifier.urihttps://doi.org/10.1016/j.jneumeth.2025.110614
dc.identifier.urihttps://hdl.handle.net/20.500.14288/31515
dc.identifier.volume425
dc.identifier.wos001612945100002
dc.keywords3D cell culture
dc.keywordsCell biochemistry
dc.keywordsCell metabolism
dc.keywordsOxidative stress
dc.keywordsTrace element and minerals
dc.language.isoeng
dc.publisherElsevier
dc.relation.affiliationKoç University
dc.relation.collectionKoç University Institutional Repository
dc.relation.ispartofJournal of Neuroscience Methods
dc.relation.openaccessYes
dc.rightsCC BY-NC-ND (Attribution-NonCommercial-NoDerivs)
dc.rights.urihttps://creativecommons.org/licenses/by-nc-nd/4.0/
dc.subjectBiochemical research methods
dc.subjectNeurosciences
dc.titleDevelopment and evaluation of a 3D-engineered neural co-culture system: impacts on oxidative stress, pentose phosphate pathway, trace element and mineral metabolisms
dc.typeJournal Article
dspace.entity.typePublication
person.familyNameAydemir
person.familyNameKeleş
person.familyNameMetin
person.familyNameSokullu
person.familyNameUlusu
person.givenNameDuygu
person.givenNameBuse
person.givenNameEcem
person.givenNameEmel
person.givenNameNuriye Nuray
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relation.isOrgUnitOfPublication91bbe15d-017f-446b-b102-ce755523d939
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