Publication:
Modeling CO2 adsorption in flexible MOFs with open metal sites via fragment-based neural network potentials

dc.contributor.departmentDepartment of Chemical and Biological Engineering
dc.contributor.kuauthorFaculty Member, Keskin, Seda
dc.contributor.kuauthorResearcher, Tayfuroğlu, Ömer
dc.contributor.schoolcollegeinstituteCollege of Engineering
dc.date.accessioned2025-09-10T04:55:31Z
dc.date.available2025-09-09
dc.date.issued2025
dc.description.abstractMetal-organic frameworks (MOFs) with open metal sites (OMS) are among the most promising porous materials for gas adsorption and separation, owing to their strong and selective interactions with guest molecules. However, simulating adsorption in such systems with high accuracy and efficiency remains a key challenge due to the need to model complex guest-MOF interactions and framework flexibility. Classical force fields often lack the precision to capture these effects, while ab initio methods are computationally prohibitive for large-scale, long-timescale simulations. In this work, we developed a neural network potential (NNP) trained on highly accurate density functional theory (PBE-D4/def2-TZVP) level data derived from a single representative fragment of the Mg-MOF-74 framework, a prototypical OMS-containing MOF, with CO(2 )molecules. Despite the limited training domain, the NNP accurately captured both intra- and inter-molecular interactions in the CO2-Mg-MOF-74 system, including those involving the open metal sites. We integrated this NNP into a hybrid molecular dynamic and grand canonical Monte Carlo simulation workflow, enabling accurate modeling of CO(2 )adsorption in flexible MOFs. This approach allows accounting for both framework dynamics and complex host-guest interactions with chemical accuracy and computational efficiency. Our results highlight the crucial role of framework flexibility in adsorption behavior and demonstrate that fragment-based NNP, when combined with advanced simulation techniques, offer a powerful and efficient approach for realistically modeling adsorption processes in MOFs with open metal sites. Published under an exclusive license by AIP Publishing.https://doi.org/10.1063/5.0280741
dc.description.fulltextNo
dc.description.harvestedfromManual
dc.description.indexedbyWOS
dc.description.indexedbyScopus
dc.description.indexedbyPubMed
dc.description.publisherscopeInternational
dc.description.readpublishN/A
dc.description.sponsoredbyTubitakEuTÜBİTAK
dc.description.sponsorshipTÜBİTAKhttps://doi.org/10.13039/501100001809 [122C159]; Scientific and Technological Research Council of Turkey-TÜBİTAK BIDEB National Scholarship Program for Postdoctoral Researchers
dc.description.volume163
dc.identifier.doi10.1063/5.0280741
dc.identifier.eissn1089-7690
dc.identifier.embargoNo
dc.identifier.issn0021-9606
dc.identifier.issue5
dc.identifier.quartileN/A
dc.identifier.urihttps://doi.org/10.1063/5.0280741
dc.identifier.urihttps://hdl.handle.net/20.500.14288/30083
dc.identifier.wos001542554500017
dc.language.isoeng
dc.publisherAip Publishing
dc.relation.affiliationKoç University
dc.relation.collectionKoç University Institutional Repository
dc.relation.ispartofJournal of chemical physics
dc.subjectChemistry, Physical
dc.subjectPhysics, Atomic, Molecular & Chemical
dc.titleModeling CO2 adsorption in flexible MOFs with open metal sites via fragment-based neural network potentials
dc.typeJournal Article
dspace.entity.typePublication
relation.isOrgUnitOfPublicationc747a256-6e0c-4969-b1bf-3b9f2f674289
relation.isOrgUnitOfPublication.latestForDiscoveryc747a256-6e0c-4969-b1bf-3b9f2f674289
relation.isParentOrgUnitOfPublication8e756b23-2d4a-4ce8-b1b3-62c794a8c164
relation.isParentOrgUnitOfPublication.latestForDiscovery8e756b23-2d4a-4ce8-b1b3-62c794a8c164

Files