Publication:
An information theoretical analysis of nanoscale molecular gap junction communication channel between cardiomyocytes

dc.contributor.kuauthorKılınç, Deniz
dc.contributor.kuauthorAkan, Özgür Barış
dc.contributor.schoolcollegeinstituteCollege of Engineering
dc.date.accessioned2024-11-09T12:39:01Z
dc.date.issued2013
dc.description.abstractMolecular communication (MC) is a promising paradigm to communicate at nanoscale and it is inspired by nature. One of the MC methods in nature is the gap junction (GJ) communication between cardiomyocytes. The GJ communication is achieved by diffusion of ions through GJ channels between the cells. The transmission of the information is realized by means of the propagation of the action potential (AP) signal. The probabilities of both the AP propagation failure and the spontaneous AP initiation are obtained. For the first time in the literature, the GJ communication channel is modeled and analyzed from the information theoretical perspective to find the communication channel capacity. A closed-form expression is derived for the capacity of the GJ communication channel. The channel capacity, propagation delay, and information transmission rate are analyzed numerically for a three-cell network. The results of the numerical analyses point out a correlation between an increase in the incidence of several cardiac diseases and a decrease in the channel capacity, an increase in the propagation delay, and either an increase or a decrease in the transmission rate. The method that we use and results that are presented may help in the investigation, diagnosis, and treatment of cardiac diseases as well as help in the design of nanodevices communicating via GJ channels.
dc.description.fulltextYES
dc.description.indexedbyWoS
dc.description.indexedbyScopus
dc.description.issue2
dc.description.openaccessYES
dc.description.publisherscopeInternational
dc.description.sponsoredbyTubitakEuTÜBİTAK
dc.description.sponsorshipScientific and Technological Research Council of Turkey (TÜBİTAK)
dc.description.sponsorshipTurkish National Academy of Sciences Distinguished Young Scientist Award Program (Turkish Academy of Sciences (TÜBA)-GEBIP)
dc.description.sponsorshipIBM through IBM Faculty Award
dc.description.versionAuthor's final manuscript
dc.description.volume12
dc.formatpdf
dc.identifier.doi10.1109/TNANO.2012.2233212
dc.identifier.eissn1941-0085
dc.identifier.embargoNO
dc.identifier.filenameinventorynoIR01114
dc.identifier.issn1536-125X
dc.identifier.linkhttps://doi.org/10.1109/TNANO.2012.2233212
dc.identifier.quartileQ3
dc.identifier.scopus2-s2.0-84874998792
dc.identifier.urihttps://hdl.handle.net/20.500.14288/2037
dc.identifier.wos316201000004
dc.keywordsMaterials science
dc.keywordsPhysics
dc.keywordsNanoscience and nanotechnology
dc.keywordsCardiac disease
dc.keywordsCardiomyocyte
dc.keywordsGap junction(GJ)
dc.keywordsMolecular communication (MC)
dc.languageEnglish
dc.publisherInstitute of Electrical and Electronics Engineers (IEEE)
dc.relation.grantno1.09E+259
dc.relation.urihttp://cdm21054.contentdm.oclc.org/cdm/ref/collection/IR/id/2012
dc.sourceIEEE Transactions on Nanotechnology
dc.subjectNanoscience and nanotechnology
dc.subjectTelecommunications
dc.titleAn information theoretical analysis of nanoscale molecular gap junction communication channel between cardiomyocytes
dc.typeJournal Article
dspace.entity.typePublication
local.contributor.kuauthorKılınç, Deniz
local.contributor.kuauthorAkan, Özgür Barış

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