Publication:
MerR and ChrR mediate blue light induced photo-oxidative stress response at the transcriptional level in Vibrio cholerae

dc.contributor.departmentDepartment of Chemical and Biological Engineering
dc.contributor.kuauthorTardu, Mehmet
dc.contributor.kuauthorBulut, Selma
dc.contributor.kuauthorKavaklı, İbrahim Halil
dc.contributor.kuprofilePhD Student
dc.contributor.otherDepartment of Chemical and Biological Engineering
dc.contributor.schoolcollegeinstituteCollege of Engineering
dc.contributor.yokidN/A
dc.contributor.yokidN/A
dc.contributor.yokid40319
dc.date.accessioned2024-11-09T13:45:13Z
dc.date.issued2017
dc.description.abstractBlue light (BL) is a major environmental factor that affects the physiology, behavior, and infectivity of bacteria as it contributes to the generation of reactive oxygen species (ROS) while increasing photo-oxidative stress in cells. However, precise photo-oxidative response mechanism in non-phototrophic bacteria is yet to be elucidated. In this study, we investigated the effect of BL in Vibrio cholerae by using genetics and transcriptome profiling. Genome-wide analysis revealed that transcription of 6.3% of V. cholerae genes were regulated by BL. We further showed that BL enhances ROS production, which is generated through the oxidative phosphorylation. To understand signaling mechanisms, we generated several knockouts and analyzed their transcriptome under BL exposure. Studies with a double-knockout confirm an anti-sigma factor (ChrR) and putative metalloregulatory-like protein (MerR) are responsible for the genome-wide regulation to BL response in V. cholerae. Collectively, these results demonstrate that MerR-like proteins, in addition to ChrR, are required for V. cholerae to mount an appropriate response against photo-oxidative stress induced by BL. Outside its natural host, V. cholerae can survive for extended periods in natural aquatic environments. Therefore, the regulation of light response for V. cholerae may be a critical cellular process for its survival in these environments.
dc.description.fulltextYES
dc.description.indexedbyWoS
dc.description.indexedbyScopus
dc.description.indexedbyPubMed
dc.description.openaccessYES
dc.description.publisherscopeInternational
dc.description.sponsoredbyTubitakEuTÜBİTAK
dc.description.sponsorshipScientific and Technological Research Council of Turkey (TÜBİTAK)-TBAG
dc.description.versionPublisher version
dc.description.volume7
dc.formatpdf
dc.identifier.doi10.1038/srep40817
dc.identifier.eissn2045-2322
dc.identifier.embargoNO
dc.identifier.filenameinventorynoIR00856
dc.identifier.issn2045-2322
dc.identifier.linkhttps://doi.org/10.1038/srep40817
dc.identifier.quartileQ2
dc.identifier.scopus2-s2.0-85010039343
dc.identifier.urihttps://hdl.handle.net/20.500.14288/3594
dc.identifier.wos392186700001
dc.keywordsNon-phototrophic bacteria
dc.keywordsAnti-sigma factor
dc.keywordsGram-negative bacteria
dc.keywordsO1 El-tor
dc.keywordsOxidative stress
dc.keywordsSinglet oxygen
dc.keywordsEscherichia-coli
dc.keywordsPhotolyase/cryptochrome family
dc.keywordsCyanidioschyzon-Merolae
dc.keywordsComplex-Ii
dc.languageEnglish
dc.publisherNature Publishing Group (NPG)
dc.relation.grantno105T417
dc.relation.urihttp://cdm21054.contentdm.oclc.org/cdm/ref/collection/IR/id/862
dc.sourceScientific Reports
dc.subjectMultidisciplinary sciences
dc.titleMerR and ChrR mediate blue light induced photo-oxidative stress response at the transcriptional level in Vibrio cholerae
dc.typeJournal Article
dspace.entity.typePublication
local.contributor.authoridN/A
local.contributor.authoridN/A
local.contributor.authorid0000-0001-6624-3505
local.contributor.kuauthorTardu, Mehmet
local.contributor.kuauthorBulut, Selma
local.contributor.kuauthorKavaklı, İbrahim Halil
relation.isOrgUnitOfPublicationc747a256-6e0c-4969-b1bf-3b9f2f674289
relation.isOrgUnitOfPublication.latestForDiscoveryc747a256-6e0c-4969-b1bf-3b9f2f674289

Files

Original bundle

Now showing 1 - 1 of 1
Thumbnail Image
Name:
862.pdf
Size:
1.9 MB
Format:
Adobe Portable Document Format