Publication:
Time-series lipidomic analysis of the oleaginous green microalga species Ettlia oleoabundans under nutrient stress

dc.contributor.coauthorMatich, E. K.
dc.contributor.coauthorGhafari, M.
dc.contributor.coauthorÇalışkan, E.
dc.contributor.coauthorPfeifer, B. A.
dc.contributor.coauthorHaznedaroğlu, B. Z.
dc.contributor.coauthorAtilla-Gökçümen, G. E.
dc.contributor.departmentDepartment of Chemical and Biological Engineering
dc.contributor.departmentDepartment of Chemical and Biological Engineering
dc.contributor.kuauthorCamgöz, Erşan
dc.contributor.schoolcollegeinstituteCollege of Engineering
dc.date.accessioned2024-11-09T12:12:59Z
dc.date.issued2018
dc.description.abstractBackground: Microalgae are uniquely advantageous organisms cultured and harvested for several value-added biochemicals. A majority of these compounds are lipid-based, such as triacylglycerols (TAGs), which can be used for biofuel production, and their accumulation is most affected under nutrient stress conditions. As such, the balance between cellular homeostasis and lipid metabolism becomes more intricate to achieve efficiency in bioproduct synthesis. Lipidomics studies in microalgae are of great importance as biochemical diversity also plays a major role in lipid regulation among oleaginous species. Methods: The aim of this study was to analyze time-series changes in lipid families produced by microalga under different nutrient conditions and growth phases to gain comprehensive information at the cellular level. For this purpose, we worked with a highly adaptable, oleaginous, non-model green microalga species, Ettlia oleoabundans (a.k.a. Neochloris oleoabundans). Using a mass spectrometry-based untargeted and targeted metabolomics' approach, we analyzed the changes in major lipid families under both replete and deplete nitrogen and phosphorus conditions at four different time points covering exponential and stationary growth phases. Results: Comprehensive analysis of the lipid metabolism highlighted the accumulation of TAGs, which can be utilized for the production of biodiesel via transesterification, and depletion of chlorophylls and certain structural lipids required for photosynthesis, under nutrient deprived conditions. We also found a correlation between the depletion of digalactosyldiacylglycerols (DGDGs) and sulfoquinovosyldiacylglycerols (SQDGs) under nutrient deprivation. Conclusions: High accumulation of TAGs under nutrient limitation as well as a depletion of other lipids of interest such as phosphatidylglycerols (PGs), DGDGs, SQDGs, and chlorophylls seem to be interconnected and related to the microalgal photosynthetic efficiency. Overall, our results provided key biochemical information on the lipid regulation and physiology of a non-model green microalga, along with optimization potential for biodiesel and other value-added product synthesis.
dc.description.fulltextYES
dc.description.indexedbyWoS
dc.description.indexedbyScopus
dc.description.indexedbyPubMed
dc.description.openaccessYES
dc.description.publisherscopeInternational
dc.description.sponsoredbyTubitakEuN/A
dc.description.sponsorshipNational Science Foundation
dc.description.sponsorshipBoğaziçi University BAP Research Fund
dc.description.sponsorshipRoyal Society of UK
dc.description.versionPublisher version
dc.description.volume11
dc.formatpdf
dc.identifier.doi10.1186/s13068-018-1026-y
dc.identifier.eissn1754-6834
dc.identifier.embargoNO
dc.identifier.filenameinventorynoIR01401
dc.identifier.issn1754-6834
dc.identifier.linkhttps://doi.org/10.1186/s13068-018-1026-y
dc.identifier.quartileQ1
dc.identifier.scopus2-s2.0-85041402385
dc.identifier.urihttps://hdl.handle.net/20.500.14288/1206
dc.identifier.wos424353600001
dc.keywordsLipidomics
dc.keywordsMicroalgae
dc.keywordsBiochemicals
dc.keywordsMetabolomics
dc.languageEnglish
dc.publisherSpringer
dc.relation.grantnoCBET-1438172
dc.relation.grantno14Y00SUP10
dc.relation.grantnoNA140481
dc.relation.urihttp://cdm21054.contentdm.oclc.org/cdm/ref/collection/IR/id/7998
dc.sourceBiotechnology for Biofuels
dc.subjectBiotechnology and applied microbiology
dc.subjectEnergy and fuels
dc.titleTime-series lipidomic analysis of the oleaginous green microalga species Ettlia oleoabundans under nutrient stress
dc.typeJournal Article
dspace.entity.typePublication
local.contributor.kuauthorCamgöz, Erşan
relation.isOrgUnitOfPublicationc747a256-6e0c-4969-b1bf-3b9f2f674289
relation.isOrgUnitOfPublication.latestForDiscoveryc747a256-6e0c-4969-b1bf-3b9f2f674289

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