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HMI-PRED 2.0: a biologist-oriented web application for prediction of host-microbe protein-protein interaction by interface mimicry

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dc.contributor.coauthorLim, H., Tsai, C.J.
dc.contributor.coauthorNussinov, R.
dc.contributor.departmentDepartment of Computer Engineering
dc.contributor.departmentDepartment of Chemical and Biological Engineering
dc.contributor.kuauthorKeskin, Özlem
dc.contributor.kuauthorGürsoy, Attila
dc.contributor.kuprofileFaculty Member
dc.contributor.otherDepartment of Computer Engineering
dc.contributor.otherDepartment of Chemical and Biological Engineering
dc.contributor.schoolcollegeinstituteCollege of Engineering
dc.contributor.yokid26605
dc.contributor.yokid8745
dc.date.accessioned2024-11-09T12:28:39Z
dc.date.issued2022
dc.description.abstractHMI-PRED 2.0 is a publicly available web service for the prediction of host-microbe protein-protein interaction by interface mimicry that is intended to be used without extensive computational experience. A microbial protein structure is screened against a database covering the entire available structural space of complexes of known human proteins.
dc.description.fulltextYES
dc.description.indexedbyWoS
dc.description.indexedbyScopus
dc.description.indexedbyPubMed
dc.description.issue21
dc.description.openaccessYES
dc.description.publisherscopeInternational
dc.description.sponsoredbyTubitakEuTÜBİTAK
dc.description.sponsorshipNational Cancer Institute
dc.description.sponsorshipNational Institutes of Health
dc.description.sponsorshipTurkish Health Institutions (TUSEB)
dc.description.sponsorshipScientific and Technological Research Council of Turkey (TÜBİTAK)
dc.description.versionPublisher version
dc.description.volume38
dc.formatpdf
dc.identifier.doi10.1093/bioinformatics/btac633
dc.identifier.eissn1367-4811
dc.identifier.embargoNO
dc.identifier.filenameinventorynoIR03972
dc.identifier.issn1367-4803
dc.identifier.linkhttps://doi.org/10.1093/bioinformatics/btac633
dc.identifier.quartileQ1
dc.identifier.scopus2-s2.0-85141004754
dc.identifier.urihttps://hdl.handle.net/20.500.14288/1819
dc.identifier.wos861416700001
dc.keywordsProteins
dc.keywordsSoftware
dc.keywordsUser-computer interface
dc.languageEnglish
dc.publisherOxford University Press (OUP)
dc.relation.grantnoHHSN261201500003I
dc.relation.grantno4081
dc.relation.grantno120C120
dc.relation.urihttp://cdm21054.contentdm.oclc.org/cdm/ref/collection/IR/id/10838
dc.sourceBioinformatics
dc.subjectBiochemistry and molecular
dc.subjectBiology
dc.subjectBiotechnology and applied microbiology
dc.subjectComputer science
dc.subjectMathematical and computational biology
dc.subjectMathematics
dc.titleHMI-PRED 2.0: a biologist-oriented web application for prediction of host-microbe protein-protein interaction by interface mimicry
dc.typeJournal Article
dspace.entity.typePublication
local.contributor.authorid0000-0002-4202-4049
local.contributor.authorid0000-0002-2297-2113
local.contributor.kuauthorKeskin, Özlem
local.contributor.kuauthorGürsoy, Attila
relation.isOrgUnitOfPublication89352e43-bf09-4ef4-82f6-6f9d0174ebae
relation.isOrgUnitOfPublicationc747a256-6e0c-4969-b1bf-3b9f2f674289
relation.isOrgUnitOfPublication.latestForDiscovery89352e43-bf09-4ef4-82f6-6f9d0174ebae

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