Publication:
Driving forces for adsorption of amphiphilic peptides to the air-water interface

dc.contributor.coauthorVilla, Alessandra
dc.contributor.coauthorHess, Berk
dc.contributor.departmentDepartment of Mechanical Engineering
dc.contributor.departmentGraduate School of Sciences and Engineering
dc.contributor.kuauthorEngin, Özge
dc.contributor.kuauthorSayar, Mehmet
dc.contributor.schoolcollegeinstituteCollege of Engineering
dc.contributor.schoolcollegeinstituteGRADUATE SCHOOL OF SCIENCES AND ENGINEERING
dc.date.accessioned2024-11-09T23:05:21Z
dc.date.issued2010
dc.description.abstractWe have studied the partitioning of amphiphilic peptides at the air-water interface. The free energy of adsorption from bulk to interface was calculated by determining the potential of mean force via atomistic molecular dynamics simulations. To this end a method is introduced to restrain or constrain the center of mass of a group of molecules in a periodic system. The model amphiphilic peptides are composed of alternating valine and asparagine residues. The decomposition of the free energy difference between the bulk and interface is studied for different peptide block lengths. Our analysis revealed that for short amphiphilic peptides the surface driving force dominantly stems from the dehydration of hydrophobic side chains. The only opposing force is associated with the loss of orientational freedom of the peptide at the interface. For the peptides studied, the free energy difference scales linearly with the size of the molecule, since the peptides mainly adopt extended conformations both in bulk and at the interface. The free energy difference depends strongly on the water model, which can be rationalized through the hydration thermodynamics of hydrophobic solutes. Finally, we measured the reduction of the surface tension associated with complete coverage of the interface with peptides.
dc.description.indexedbyWOS
dc.description.indexedbyScopus
dc.description.indexedbyPubMed
dc.description.issue34
dc.description.openaccessNO
dc.description.publisherscopeInternational
dc.description.sponsoredbyTubitakEuN/A
dc.description.sponsorshipTUBITAK[106T575]
dc.description.sponsorshipMax Planck Society M S and O E thank TUBITAK(106T575) and the Max Planck Society for financial support through the Partner Group Agreement with Prof. Kurt Kremer's Theory Group at MPIP, Mainz. We also thank Dr Raymond Tu and his group for scientific discussions and shims their experimental results on the peptide molecule B H. thanks Dr Sander Pronk tor extensive discussions on surface tension effects
dc.description.volume114
dc.identifier.doi10.1021/jp1024922
dc.identifier.eissn1520-5207
dc.identifier.issn1520-6106
dc.identifier.quartileQ3
dc.identifier.scopus2-s2.0-77956083139
dc.identifier.urihttps://doi.org/10.1021/jp1024922
dc.identifier.urihttps://hdl.handle.net/20.500.14288/8784
dc.identifier.wos281128700020
dc.keywordsMolecular-dynamics simulations
dc.keywordsAir, water interface
dc.keywordsHydration
dc.keywordsSolvation
dc.keywordsEfficient
dc.keywordsEnthalpy
dc.keywordsDesign
dc.keywordsModels
dc.keywordsFilms
dc.language.isoeng
dc.publisherAmerican Chemical Society (ACS)
dc.relation.ispartofJournal of Physical Chemistry B
dc.subjectChemistry
dc.subjectPhysical
dc.titleDriving forces for adsorption of amphiphilic peptides to the air-water interface
dc.typeJournal Article
dspace.entity.typePublication
local.contributor.kuauthorEngin, Özge
local.contributor.kuauthorSayar, Mehmet
local.publication.orgunit1GRADUATE SCHOOL OF SCIENCES AND ENGINEERING
local.publication.orgunit1College of Engineering
local.publication.orgunit2Department of Mechanical Engineering
local.publication.orgunit2Graduate School of Sciences and Engineering
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