Publication: Driving forces for adsorption of amphiphilic peptides to the air-water interface
dc.contributor.coauthor | Villa, Alessandra | |
dc.contributor.coauthor | Hess, Berk | |
dc.contributor.department | Department of Mechanical Engineering | |
dc.contributor.department | Graduate School of Sciences and Engineering | |
dc.contributor.kuauthor | Engin, Özge | |
dc.contributor.kuauthor | Sayar, Mehmet | |
dc.contributor.schoolcollegeinstitute | College of Engineering | |
dc.contributor.schoolcollegeinstitute | GRADUATE SCHOOL OF SCIENCES AND ENGINEERING | |
dc.date.accessioned | 2024-11-09T23:05:21Z | |
dc.date.issued | 2010 | |
dc.description.abstract | We have studied the partitioning of amphiphilic peptides at the air-water interface. The free energy of adsorption from bulk to interface was calculated by determining the potential of mean force via atomistic molecular dynamics simulations. To this end a method is introduced to restrain or constrain the center of mass of a group of molecules in a periodic system. The model amphiphilic peptides are composed of alternating valine and asparagine residues. The decomposition of the free energy difference between the bulk and interface is studied for different peptide block lengths. Our analysis revealed that for short amphiphilic peptides the surface driving force dominantly stems from the dehydration of hydrophobic side chains. The only opposing force is associated with the loss of orientational freedom of the peptide at the interface. For the peptides studied, the free energy difference scales linearly with the size of the molecule, since the peptides mainly adopt extended conformations both in bulk and at the interface. The free energy difference depends strongly on the water model, which can be rationalized through the hydration thermodynamics of hydrophobic solutes. Finally, we measured the reduction of the surface tension associated with complete coverage of the interface with peptides. | |
dc.description.indexedby | WOS | |
dc.description.indexedby | Scopus | |
dc.description.indexedby | PubMed | |
dc.description.issue | 34 | |
dc.description.openaccess | NO | |
dc.description.publisherscope | International | |
dc.description.sponsoredbyTubitakEu | N/A | |
dc.description.sponsorship | TUBITAK[106T575] | |
dc.description.sponsorship | Max Planck Society M S and O E thank TUBITAK(106T575) and the Max Planck Society for financial support through the Partner Group Agreement with Prof. Kurt Kremer's Theory Group at MPIP, Mainz. We also thank Dr Raymond Tu and his group for scientific discussions and shims their experimental results on the peptide molecule B H. thanks Dr Sander Pronk tor extensive discussions on surface tension effects | |
dc.description.volume | 114 | |
dc.identifier.doi | 10.1021/jp1024922 | |
dc.identifier.eissn | 1520-5207 | |
dc.identifier.issn | 1520-6106 | |
dc.identifier.quartile | Q3 | |
dc.identifier.scopus | 2-s2.0-77956083139 | |
dc.identifier.uri | https://doi.org/10.1021/jp1024922 | |
dc.identifier.uri | https://hdl.handle.net/20.500.14288/8784 | |
dc.identifier.wos | 281128700020 | |
dc.keywords | Molecular-dynamics simulations | |
dc.keywords | Air, water interface | |
dc.keywords | Hydration | |
dc.keywords | Solvation | |
dc.keywords | Efficient | |
dc.keywords | Enthalpy | |
dc.keywords | Design | |
dc.keywords | Models | |
dc.keywords | Films | |
dc.language.iso | eng | |
dc.publisher | American Chemical Society (ACS) | |
dc.relation.ispartof | Journal of Physical Chemistry B | |
dc.subject | Chemistry | |
dc.subject | Physical | |
dc.title | Driving forces for adsorption of amphiphilic peptides to the air-water interface | |
dc.type | Journal Article | |
dspace.entity.type | Publication | |
local.contributor.kuauthor | Engin, Özge | |
local.contributor.kuauthor | Sayar, Mehmet | |
local.publication.orgunit1 | GRADUATE SCHOOL OF SCIENCES AND ENGINEERING | |
local.publication.orgunit1 | College of Engineering | |
local.publication.orgunit2 | Department of Mechanical Engineering | |
local.publication.orgunit2 | Graduate School of Sciences and Engineering | |
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