Publication:
Protein interaction networks of the mammalian core clock proteins

dc.contributor.coauthorÖzturk, Nuri
dc.contributor.departmentDepartment of Chemical and Biological Engineering
dc.contributor.departmentDepartment of Molecular Biology and Genetics
dc.contributor.departmentDepartment of Chemical and Biological Engineering
dc.contributor.departmentDepartment of Molecular Biology and Genetics
dc.contributor.kuauthorKavaklı, İbrahim Halil
dc.contributor.kuauthorBarış, İbrahim
dc.contributor.kuprofileFaculty Member
dc.contributor.kuprofileTeaching Faculty
dc.contributor.schoolcollegeinstituteCollege of Engineering
dc.contributor.schoolcollegeinstituteCollege of Sciences
dc.contributor.yokid40319
dc.contributor.yokid111629
dc.date.accessioned2024-11-09T23:46:25Z
dc.date.issued2022
dc.description.abstractCircadian rhythm is a 24-h cycle that regulates the biochemical and behavioral changes of organisms. It controls a wide range of functions, from gene expression to behavior, allowing organisms to anticipate daily changes in their environment. In mammals, circadian rhythm is generated by a complex transcriptional and translational feedback loop mechanism. The binding of CLOCK/BMAL1 heterodimer to the E-box of DNA located within the promoter region initiates transcription of clock control genes including the transcription of the other two core clock genes of Periods (Pers) and Cryptochromes (Crys). Then PERs and CRYs along with casein kinase 1ɛ/Δ translocate into the nucleus where they suppress CLOCK/BMAL1 transactivation and, in turn, clock-regulated gene expression. Various clock components must be operational to aid in their stabilization and period extension in circadian rhythm. In this review, we have highlighted the recent progress for the core clock interacting proteins to maintain and to stabilize circadian rhythm in mammals.
dc.description.indexedbyWoS
dc.description.indexedbyScopus
dc.description.indexedbyPubMed
dc.description.openaccessNO
dc.description.publisherscopeInternational
dc.description.sponsorshipTUBITAK[112T444] We would like to thank Dr. Seref Gul and Onur Ozcan for helping us to prepare the figures. I.H.K. would like to thank TUBITAK112T444 for the financial support.
dc.identifier.doi10.1016/bs.apcsb.2022.04.001
dc.identifier.eissnN/A
dc.identifier.isbn978-0-323-99231-2
dc.identifier.issn1876-1623
dc.identifier.quartileQ2
dc.identifier.scopus2-s2.0-85130506965
dc.identifier.urihttp://dx.doi.org/10.1016/bs.apcsb.2022.04.001
dc.identifier.urihttps://hdl.handle.net/20.500.14288/13959
dc.identifier.wos873721000006
dc.keywordsHypoxia-inducible factor-1
dc.keywordsCircadian gene-expression
dc.keywordsPhotolyase/cryptochrome familiy
dc.keywordsLocomotor-activity
dc.keywordsPER2
dc.languageEnglish
dc.publisherAcademic Press Inc Elsevier Science
dc.sourceProtein Interaction Networks, Vol. 131
dc.subjectBiochemistry
dc.subjectmolecular biology
dc.titleProtein interaction networks of the mammalian core clock proteins
dc.typeBook Chapter
dspace.entity.typePublication
local.contributor.authorid0000-0001-6624-3505
local.contributor.authorid0000-0003-2185-3259
local.contributor.kuauthorKavaklı, İbrahim Halil
local.contributor.kuauthorBarış, İbrahim
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relation.isOrgUnitOfPublication.latestForDiscoveryaee2d329-aabe-4b58-ba67-09dbf8575547

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