Publication:
Contrast improvement through a Generative Adversarial Network (GAN) by utilizing a dataset obtained from a line-scanning confocal microscope

dc.contributor.departmentDepartment of Physics
dc.contributor.kuauthorKiraz, Alper
dc.contributor.kuauthorMorova, Berna
dc.contributor.kuauthorBavili, Nima
dc.contributor.kuauthorKetabchi, Amir Mohammad
dc.contributor.otherDepartment of Physics
dc.contributor.researchcenterKoç University Research Center for Translational Medicine (KUTTAM) / Koç Üniversitesi Translasyonel Tıp Araştırma Merkezi (KUTTAM)
dc.contributor.schoolcollegeinstituteCollege of Sciences
dc.contributor.schoolcollegeinstituteGraduate School of Sciences and Engineering
dc.date.accessioned2024-12-29T09:41:22Z
dc.date.issued2024
dc.description.abstractConfocal microscopy offers enhanced image contrast and signal-to-noise ratio compared to wide-field illumination microscopy, achieved by effectively eliminating out-of-focus background noise. In our study, we initially showcase the functionality of a line-scanning confocal microscope aligned through the utilization of a Digital Light Projector (DLP) and a rolling shutter CMOS camera. In this technique, a sequence of illumination lines is projected onto a sample using a DLP and focusing objective (50X, NA=0.55). The reflected light is imaged with the camera. Line-scanning confocal imaging is accomplished by synchronizing the illumination lines with the rolling shutter of the sensor, leading to a substantial enhancement of approximately 50% in image contrast. Subsequently, this setup is employed to create a dataset comprising 500 pairs of images of paper tissue. This dataset is employed for training a Generative Adversarial Network (cGAN). Roughly 45% contrast improvement was measured in the test images for the trained network, in comparison to the ground-truth images.
dc.description.indexedbyWoS
dc.description.publisherscopeInternational
dc.description.sponsoredbyTubitakEuTÜBİTAK
dc.description.sponsorsThis study was supported by The Scientific and Technological Research Council of Turkey (Grant No 120F326). A. Kiraz acknowledges partial support from the Turkish Academy of Sciences (T\u00DCBA). We thank Musa Ayd\u0131n for fruitful discussions.
dc.identifier.doi10.1117/12.3016368
dc.identifier.isbn978-151067314-4
dc.identifier.issn0277-786X
dc.identifier.quartileN/A
dc.identifier.urihttps://doi.org/10.1117/12.3016368
dc.identifier.urihttps://hdl.handle.net/20.500.14288/23606
dc.identifier.wos1275369100019
dc.keywordsGenerative Adversarial Network (GAN)
dc.languageen
dc.publisherSPIE
dc.sourceProceedings of SPIE - The International Society for Optical Engineering
dc.subjectPhysics
dc.titleContrast improvement through a Generative Adversarial Network (GAN) by utilizing a dataset obtained from a line-scanning confocal microscope
dc.typeConference proceeding
dspace.entity.typePublication
local.contributor.kuauthorKiraz, Alper
local.contributor.kuauthorMorova, Berna
local.contributor.kuauthorBavili, Nima
local.contributor.kuauthorKetabchi, Amir Mohammad
relation.isOrgUnitOfPublicationc43d21f0-ae67-4f18-a338-bcaedd4b72a4
relation.isOrgUnitOfPublication.latestForDiscoveryc43d21f0-ae67-4f18-a338-bcaedd4b72a4

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