Publication:
Programmable 3DP microfluidic bio-reaction system: automated LAMP-on-a-chip

dc.contributor.departmentSchool of Medicine
dc.contributor.departmentDepartment of Mechanical Engineering
dc.contributor.departmentKUIS AI (Koç University & İş Bank Artificial Intelligence Center)
dc.contributor.departmentKUAR (KU Arçelik Research Center for Creative Industries)
dc.contributor.departmentKUTTAM (Koç University Research Center for Translational Medicine)
dc.contributor.kuauthorPhD Student, Birtek, Mehmet Tuğrul
dc.contributor.kuauthorOther, Atçeken, Nazente
dc.contributor.kuauthorFaculty Member, Taşoğlu, Savaş
dc.contributor.schoolcollegeinstituteSCHOOL OF MEDICINE
dc.contributor.schoolcollegeinstituteResearch Center
dc.contributor.schoolcollegeinstituteCollege of Engineering
dc.date.accessioned2025-09-10T04:56:21Z
dc.date.available2025-09-09
dc.date.issued2025
dc.description.abstractPoint-of-care (PoC) devices have revolutionized healthcare by enabling remote diagnostics and therapeutics, with microfluidic systems playing a pivotal role in their advancement. This study focuses on the detailed engineering and characterization of three-dimensional hydrophobic valves to form novel programmable bio-reaction reservoirs. Using 3D-printed soft lithography, we meticulously investigated the effects of channel dimensions and surface properties on the burst pressures of these reservoirs, which ranged from 6.4 to 44.8 mbar. The bio-reaction reservoirs were demonstrated in both series and parallel configurations, offering versatile platforms for the miniaturization and automation of biological processes. Our findings highlight the capability of these reservoirs to program flows in a variety of fluid samples, including water, blood and serum. Additionally, a portable pressure pump was developed to leverage the functionality of these hydrophobic valves, enabling precise control of fluid dynamics in PoC applications. The study culminated in the design of a microfluidic chip integrating two consecutive reservoirs for the PoC execution of loop-mediated isothermal amplification (LAMP) for detection of the Mpox virus. Primers were lyophilized within the bio-reservoirs, and the system successfully enabled visible colorimetric detection via the LAMP assay.
dc.description.fulltextYes
dc.description.harvestedfromManual
dc.description.indexedbyWOS
dc.description.indexedbyScopus
dc.description.indexedbyPubMed
dc.description.openaccessGold OA
dc.description.publisherscopeInternational
dc.description.readpublishN/A
dc.description.sponsoredbyTubitakEuTÜBİTAK
dc.description.sponsorshipTÜBİTAK [2232, 118C391, 2218, 122C195, 1001, 123S582]; Alexander von Humboldt Research Fellowship for Experienced Researchers; Marie Sklodowska-Curie Individual Fellowship [101003361]; Royal Academy Newton-Katip Celebi Transforming Systems Through Partnership Award [120 N019]
dc.description.versionPublished Version
dc.identifier.doi10.1039/d5lc00003c
dc.identifier.eissn1473-0189
dc.identifier.embargoNo
dc.identifier.filenameinventorynoIR06381
dc.identifier.issn1473-0197
dc.identifier.quartileQ1
dc.identifier.scopus2-s2.0-105016872705
dc.identifier.urihttps://doi.org/10.1039/d5lc00003c
dc.identifier.urihttps://hdl.handle.net/20.500.14288/30141
dc.identifier.wos001546198000001
dc.language.isoeng
dc.publisherRoyal Soc Chemistry
dc.relation.affiliationKoç University
dc.relation.collectionKoç University Institutional Repository
dc.relation.ispartofLab on a Chip
dc.relation.openaccessYes
dc.rightsCC BY-NC (Attribution-NonCommercial)
dc.rights.urihttps://creativecommons.org/licenses/by-nc/4.0/
dc.subjectBiochemical research methods
dc.subjectChemistry
dc.subjectNanoscience and nanotechnology
dc.titleProgrammable 3DP microfluidic bio-reaction system: automated LAMP-on-a-chip
dc.typeJournal Article
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