Publication: Interactome analysis of Bag-1 isoforms reveals novel interaction partners in endoplasmic reticulum-associated degradation
dc.contributor.coauthor | Can, Nisan Denizce | |
dc.contributor.coauthor | Baştürk, Ezgi | |
dc.contributor.coauthor | Kızılboğa, Tuğba | |
dc.contributor.coauthor | Akçay, İzzet Mehmet | |
dc.contributor.coauthor | Dingiloğlu, Baran | |
dc.contributor.coauthor | Tatlı, Özge | |
dc.contributor.coauthor | Acar, Sevilay | |
dc.contributor.coauthor | Kılbaş, Pelin Özfiliz | |
dc.contributor.coauthor | Jannuzzi, Ayşe Tarbin | |
dc.contributor.coauthor | Doğanay, Hamdi Levent | |
dc.contributor.coauthor | Yılmaz, Betül Karademir | |
dc.contributor.coauthor | Doğanay, Gizem Dinler | |
dc.contributor.department | Department of Computer Engineering | |
dc.contributor.department | Department of Chemical and Biological Engineering | |
dc.contributor.kuauthor | Gürsoy, Attila | |
dc.contributor.kuauthor | Keskin, Özlem | |
dc.contributor.kuauthor | Elbeyli, Efe | |
dc.contributor.kuauthor | Muratçıoğlu, Serena | |
dc.contributor.kuprofile | Faculty Member | |
dc.contributor.other | Department of Computer Engineering | |
dc.contributor.other | Department of Chemical and Biological Engineering | |
dc.contributor.schoolcollegeinstitute | College of Engineering | |
dc.contributor.yokid | 8745 | |
dc.contributor.yokid | 26605 | |
dc.contributor.yokid | N/A | |
dc.contributor.yokid | N/A | |
dc.date.accessioned | 2024-11-09T12:24:59Z | |
dc.date.issued | 2021 | |
dc.description.abstract | Bag-1 is a multifunctional protein that regulates Hsp70 chaperone activity, apoptosis, and proliferation. The three major Bag-1 isoforms have different subcellular localizations and partly non-overlapping functions. To identify the detailed interaction network of each isoform, we utilized mass spectrometry-based proteomics and found that interactomes of Bag-1 isoforms contained many common proteins, with variations in their abundances. Bag-1 interactomes were enriched with proteins involved in protein processing and degradation pathways. Novel interaction partners included VCP/p97; a transitional ER ATPase, Rad23B; a shuttling factor for ubiquitinated proteins, proteasome components, and ER-resident proteins, suggesting a role for Bag-1 also in ER-associated protein degradation (ERAD). Bag-1 pull-down from cells and tissues from breast cancer patients validated these interactions and showed cancer-related prominence. Using in silico predictions we detected hotspot residues of Bag-1. Mutations of these residues caused loss of binding to protein quality control elements and impaired proteasomal activity in MCF-7 cells. Following CD147 glycosylation pattern, we showed that Bag-1 downregulated VCP/p97-dependent ERAD. Overall, our data extends the interaction map of Bag-1, and broadens its role in protein homeostasis. Targeting the interaction surfaces revealed in this study might be an effective strategy in the treatment of cancer. | |
dc.description.fulltext | YES | |
dc.description.indexedby | WoS | |
dc.description.indexedby | Scopus | |
dc.description.indexedby | PubMed | |
dc.description.issue | 8 | |
dc.description.openaccess | YES | |
dc.description.publisherscope | International | |
dc.description.sponsoredbyTubitakEu | TÜBİTAK | |
dc.description.sponsorship | Scientific and Technological Research Council of Turkey (TÜBİTAK) | |
dc.description.sponsorship | Istanbul Technical University Internal Research Funds | |
dc.description.version | Publisher version | |
dc.description.volume | 16 | |
dc.format | ||
dc.identifier.doi | 10.1371/journal.pone.0256640 | |
dc.identifier.embargo | NO | |
dc.identifier.filenameinventoryno | IR03123 | |
dc.identifier.issn | 1932-6203 | |
dc.identifier.link | https://doi.org/10.1371/journal.pone.0256640 | |
dc.identifier.quartile | Q2 | |
dc.identifier.scopus | 2-s2.0-85113980470 | |
dc.identifier.uri | https://hdl.handle.net/20.500.14288/1522 | |
dc.identifier.wos | 687944100029 | |
dc.keywords | Breast cancer cell line | |
dc.keywords | Cancer tissue | |
dc.keywords | Computer model | |
dc.keywords | Controlled study | |
dc.keywords | Down regulation | |
dc.keywords | Endoplasmic reticulum associated degradation | |
dc.language | English | |
dc.publisher | Public Library of Science | |
dc.relation.grantno | 115Z169 | |
dc.relation.grantno | 117Z848 | |
dc.relation.grantno | 119Z261 | |
dc.relation.grantno | 2017-40854 | |
dc.relation.uri | http://cdm21054.contentdm.oclc.org/cdm/ref/collection/IR/id/9783 | |
dc.source | PLOS One | |
dc.subject | Science and technology | |
dc.title | Interactome analysis of Bag-1 isoforms reveals novel interaction partners in endoplasmic reticulum-associated degradation | |
dc.type | Journal Article | |
dspace.entity.type | Publication | |
local.contributor.authorid | 0000-0002-2297-2113 | |
local.contributor.authorid | 0000-0002-4202-4049 | |
local.contributor.authorid | N/A | |
local.contributor.authorid | N/A | |
local.contributor.kuauthor | Gürsoy, Attila | |
local.contributor.kuauthor | Keskin, Özlem | |
local.contributor.kuauthor | Elbeyli, Efe | |
local.contributor.kuauthor | Muratçıoğlu, Serena | |
relation.isOrgUnitOfPublication | 89352e43-bf09-4ef4-82f6-6f9d0174ebae | |
relation.isOrgUnitOfPublication | c747a256-6e0c-4969-b1bf-3b9f2f674289 | |
relation.isOrgUnitOfPublication.latestForDiscovery | 89352e43-bf09-4ef4-82f6-6f9d0174ebae |
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