Publication:
Interactome analysis of Bag-1 isoforms reveals novel interaction partners in endoplasmic reticulum-associated degradation

dc.contributor.coauthorCan, Nisan Denizce
dc.contributor.coauthorBaştürk, Ezgi
dc.contributor.coauthorKızılboğa, Tuğba
dc.contributor.coauthorAkçay, İzzet Mehmet
dc.contributor.coauthorDingiloğlu, Baran
dc.contributor.coauthorTatlı, Özge
dc.contributor.coauthorAcar, Sevilay
dc.contributor.coauthorKılbaş, Pelin Özfiliz
dc.contributor.coauthorJannuzzi, Ayşe Tarbin
dc.contributor.coauthorDoğanay, Hamdi Levent
dc.contributor.coauthorYılmaz, Betül Karademir
dc.contributor.coauthorDoğanay, Gizem Dinler
dc.contributor.departmentDepartment of Computer Engineering
dc.contributor.departmentDepartment of Chemical and Biological Engineering
dc.contributor.kuauthorGürsoy, Attila
dc.contributor.kuauthorKeskin, Özlem
dc.contributor.kuauthorElbeyli, Efe
dc.contributor.kuauthorMuratçıoğlu, Serena
dc.contributor.kuprofileFaculty Member
dc.contributor.otherDepartment of Computer Engineering
dc.contributor.otherDepartment of Chemical and Biological Engineering
dc.contributor.schoolcollegeinstituteCollege of Engineering
dc.contributor.yokid8745
dc.contributor.yokid26605
dc.contributor.yokidN/A
dc.contributor.yokidN/A
dc.date.accessioned2024-11-09T12:24:59Z
dc.date.issued2021
dc.description.abstractBag-1 is a multifunctional protein that regulates Hsp70 chaperone activity, apoptosis, and proliferation. The three major Bag-1 isoforms have different subcellular localizations and partly non-overlapping functions. To identify the detailed interaction network of each isoform, we utilized mass spectrometry-based proteomics and found that interactomes of Bag-1 isoforms contained many common proteins, with variations in their abundances. Bag-1 interactomes were enriched with proteins involved in protein processing and degradation pathways. Novel interaction partners included VCP/p97; a transitional ER ATPase, Rad23B; a shuttling factor for ubiquitinated proteins, proteasome components, and ER-resident proteins, suggesting a role for Bag-1 also in ER-associated protein degradation (ERAD). Bag-1 pull-down from cells and tissues from breast cancer patients validated these interactions and showed cancer-related prominence. Using in silico predictions we detected hotspot residues of Bag-1. Mutations of these residues caused loss of binding to protein quality control elements and impaired proteasomal activity in MCF-7 cells. Following CD147 glycosylation pattern, we showed that Bag-1 downregulated VCP/p97-dependent ERAD. Overall, our data extends the interaction map of Bag-1, and broadens its role in protein homeostasis. Targeting the interaction surfaces revealed in this study might be an effective strategy in the treatment of cancer.
dc.description.fulltextYES
dc.description.indexedbyWoS
dc.description.indexedbyScopus
dc.description.indexedbyPubMed
dc.description.issue8
dc.description.openaccessYES
dc.description.publisherscopeInternational
dc.description.sponsoredbyTubitakEuTÜBİTAK
dc.description.sponsorshipScientific and Technological Research Council of Turkey (TÜBİTAK)
dc.description.sponsorshipIstanbul Technical University Internal Research Funds
dc.description.versionPublisher version
dc.description.volume16
dc.formatpdf
dc.identifier.doi10.1371/journal.pone.0256640
dc.identifier.embargoNO
dc.identifier.filenameinventorynoIR03123
dc.identifier.issn1932-6203
dc.identifier.linkhttps://doi.org/10.1371/journal.pone.0256640
dc.identifier.quartileQ2
dc.identifier.scopus2-s2.0-85113980470
dc.identifier.urihttps://hdl.handle.net/20.500.14288/1522
dc.identifier.wos687944100029
dc.keywordsBreast cancer cell line
dc.keywordsCancer tissue
dc.keywordsComputer model
dc.keywordsControlled study
dc.keywordsDown regulation
dc.keywordsEndoplasmic reticulum associated degradation
dc.languageEnglish
dc.publisherPublic Library of Science
dc.relation.grantno115Z169
dc.relation.grantno117Z848
dc.relation.grantno119Z261
dc.relation.grantno2017-40854
dc.relation.urihttp://cdm21054.contentdm.oclc.org/cdm/ref/collection/IR/id/9783
dc.sourcePLOS One
dc.subjectScience and technology
dc.titleInteractome analysis of Bag-1 isoforms reveals novel interaction partners in endoplasmic reticulum-associated degradation
dc.typeJournal Article
dspace.entity.typePublication
local.contributor.authorid0000-0002-2297-2113
local.contributor.authorid0000-0002-4202-4049
local.contributor.authoridN/A
local.contributor.authoridN/A
local.contributor.kuauthorGürsoy, Attila
local.contributor.kuauthorKeskin, Özlem
local.contributor.kuauthorElbeyli, Efe
local.contributor.kuauthorMuratçıoğlu, Serena
relation.isOrgUnitOfPublication89352e43-bf09-4ef4-82f6-6f9d0174ebae
relation.isOrgUnitOfPublicationc747a256-6e0c-4969-b1bf-3b9f2f674289
relation.isOrgUnitOfPublication.latestForDiscovery89352e43-bf09-4ef4-82f6-6f9d0174ebae

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