Publication:
Statistical mechanics of proteins in the random coil state

Simple item page
dc.contributor.departmentDepartment of Chemical and Biological Engineering
dc.contributor.departmentN/A
dc.contributor.kuauthorErman, Burak
dc.contributor.kuauthorBayrak, Çiğdem Sevim
dc.contributor.kuprofileFaculty Member
dc.contributor.kuprofilePhD Student
dc.contributor.otherDepartment of Chemical and Biological Engineering
dc.contributor.schoolcollegeinstituteCollege of Engineering
dc.contributor.schoolcollegeinstituteGraduate School of Sciences and Engineering
dc.contributor.yokid179997
dc.contributor.yokidN/A
dc.date.accessioned2024-11-09T23:05:04Z
dc.date.issued2012
dc.description.abstractDenatured proteins are mostly partially folded and compact proteins. A statistical analysis on thermodynamic properties is presented to describe and characterize denatured proteins. Conformational free energy, energy, entropy and heat capacity expressions are derived using the Rotational Isomeric States model of polymer theory. The state space and the probabilities of each state are comprised from a coil database. Properties for the denatured state are obtained for a sample set of proteins taken from the Protein Data Bank. Thermodynamic expressions of denatured state are derived.
dc.description.indexedbyScopus
dc.description.indexedbyWoS
dc.description.openaccessYES
dc.description.publisherscopeInternational
dc.identifier.doi10.5220/0003785202200225
dc.identifier.isbn9789-8984-2590-4
dc.identifier.linkhttps://www.scopus.com/inward/record.uri?eid=2-s2.0-84861996003andpartnerID=40andmd5=ceb7162ce52964a3acdc7686b05a8481
dc.identifier.quartileN/A
dc.identifier.scopus2-s2.0-84861996003
dc.identifier.urihttp://dx.doi.org/10.5220/0003785202200225
dc.identifier.urihttps://hdl.handle.net/20.500.14288/8749
dc.identifier.wos310729400029
dc.keywordsDenatured state
dc.keywordsRandom coil
dc.keywordsRotational isomeric state COIL database
dc.keywordsConformational free energy
dc.keywordsDenatured proteins
dc.keywordsDenatured state
dc.keywordsPolymer theory
dc.keywordsProtein data bank
dc.keywordsRandom coil
dc.keywordsRandom coil state
dc.keywordsRotational isomeric state
dc.keywordsSample sets
dc.keywordsState space
dc.keywordsThermodynamic expression
dc.keywordsAlgorithms
dc.keywordsDenaturation
dc.keywordsMathematical models
dc.keywordsProteins
dc.keywordsStatistical mechanics
dc.keywordsBioinformatics
dc.languageEnglish
dc.publisherSciTePress
dc.sourceBioinformatics 2012 - Proceedings of the International Conference on Bioinformatics Models, Methods and Algorithms
dc.subjectEngineering
dc.subjectChemical biological engineering
dc.titleStatistical mechanics of proteins in the random coil state
dc.typeConference proceeding
dspace.entity.typePublication
local.contributor.authorid0000-0002-2496-6059
local.contributor.authorid0000-0002-3883-5535
local.contributor.kuauthorErman, Burak
local.contributor.kuauthorBayrak, Çiğdem Sevim
relation.isOrgUnitOfPublicationc747a256-6e0c-4969-b1bf-3b9f2f674289
relation.isOrgUnitOfPublication.latestForDiscoveryc747a256-6e0c-4969-b1bf-3b9f2f674289

Files

Collections

Publications without Fulltext