Publication:
Exploring the candidate terminal glycan profile in neural regeneration of the sea urchin paracentrotus lividus, using lectin blotting and mass spectrometry

dc.contributor.coauthorSahar, Umut
dc.contributor.coauthorDeveci, Remziye
dc.contributor.departmentN/A
dc.contributor.kuauthorDemir, Ramiz
dc.contributor.kuprofilePHD. Student
dc.contributor.schoolcollegeinstituteGraduate School of Health Sciences
dc.contributor.yokidN/A
dc.date.accessioned2024-11-09T23:35:23Z
dc.description.abstractGlycans are expressed as conjugates of glycoproteins, glycolipids, and proteoglycans. The huge diversity of glycans on glycoconjugates contributes to many biological processes, from glycan-based molecular recognition to developmental events, such as regeneration in the nervous system. Echinoderms, which have a close phylogenetic relationship with chordates, are an important group of marine invertebrates for body regeneration. Although many major roles of glycans on glycoconjugates are known, their role in the glycosylation profile of the nervous system in sea urchins is poorly understood. In this study, we aimed to determine the terminal glycan profile by lectin blotting and to quantify sialic acids by the capillary liquid chromatography electrospray ionization tandem mass spectrometry system in the nervous tissue of the sea urchin Paracentrotus lividus. We determined the N-acetyl-D-glucosamine, mannose, and sialic acids (mainly alpha 2,3 linked) by lectin blotting and five types of sialic acids (N-glycolylneuraminic acid, N-acetylneuraminic acid, 9-O-acetyl-N-alycolylneuraminic acid, 5-N-acetyl-9-O-acetyl-N-acetylneuraminic acid, and di-O-acetylated-N-alycolylneuraminic acid) by capillary liquid chromatography electrospray ionization tandem mass spectrometry. This potential first description of the terminal glycan profile in the nervous system of the sea urchin is expected to help us understand its role in nervous system development and regeneration.
dc.description.indexedbyWoS
dc.description.indexedbyPubMed
dc.description.openaccessNO
dc.description.publisherscopeInternational
dc.description.sponsoredbyTubitakEuN/A
dc.identifier.doi10.1086/718776
dc.identifier.eissn1939-8697
dc.identifier.issn0006-3185
dc.identifier.quartileQ3
dc.identifier.urihttp://dx.doi.org/10.1086/718776
dc.identifier.urihttps://hdl.handle.net/20.500.14288/12490
dc.identifier.wos768009400001
dc.keywordsMyelin-associated glycoprotein
dc.keywordsN-glycolylneuraminic acid
dc.keywordsEgg jelly coat
dc.keywordsSialic-acid
dc.keywordsExtracellular domain
dc.keywordsbiological roles
dc.keywords9-o-acetyl gd3
dc.keywordsProtein
dc.keywordsGangliosides
dc.keywordsExpression
dc.languageEnglish
dc.publisherUniv Chicago Press
dc.sourceBiological Bulletin
dc.subjectBiology
dc.subjectMarine freshwater biology
dc.titleExploring the candidate terminal glycan profile in neural regeneration of the sea urchin paracentrotus lividus, using lectin blotting and mass spectrometry
dc.typeJournal Article
dspace.entity.typePublication
local.contributor.authorid0000-0001-6435-7883
local.contributor.kuauthorDemir, Ramiz

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