Publication:
New tools for data harmonization and their potential applications in organ transplantation

dc.contributor.coauthorFoster, Bethany Joy
dc.contributor.departmentN/A
dc.contributor.kuauthorTabatabaei Hosseini, Seyed Amir
dc.contributor.kuauthorKazemzadeh, Reza
dc.contributor.kuauthorArpalı, Emre
dc.contributor.kuauthorSüsal, Caner
dc.contributor.researchcenterKoç University Transplant Immunology Research Centre of Excellence (TIREX)
dc.contributor.schoolcollegeinstituteSchool of Medicine
dc.contributor.schoolcollegeinstituteGraduate School of Sciences and Engineering
dc.contributor.unitKoç University Hospital
dc.date.accessioned2024-12-29T09:39:55Z
dc.date.issued2024
dc.description.abstractIn organ transplantation, accurate analysis of clinical outcomes requires large, high-quality data sets. Not only are outcomes influenced by a multitude of factors such as donor, recipient, and transplant characteristics and posttransplant events but they may also change over time. Although large data sets already exist and are continually expanding in transplant registries and health institutions, these data are rarely combined for analysis because of a lack of harmonization. Promoted by the digitalization of the healthcare sector, effective data harmonization tools became available, with potential applications also for organ transplantation. We discuss herein the present problems in the harmonization of organ transplant data and offer solutions to enhance its accuracy through the use of emerging new tools. To overcome the problem of inadequate representation of transplantation-specific terms, ontologies and common data models particular to this field could be created and supported by a consortium of related stakeholders to ensure their broad acceptance. Adopting clear data-sharing policies can diminish administrative barriers that impede collaboration between organizations. Secure multiparty computation frameworks and the artificial intelligence (AI) approach federated learning can facilitate decentralized and harmonized analysis of data sets, without sharing sensitive data and compromising patient privacy. A common image data model built upon a standardized format would be beneficial to AI-based analysis of pathology images. Implementation of these promising new tools and measures, ideally with the involvement and support of transplant societies, is expected to produce improved integration and harmonization of transplant data and greater accuracy in clinical decision-making, enabling improved patient outcomes.
dc.description.indexedbyWoS
dc.description.indexedbyScopus
dc.description.indexedbyPubMed
dc.description.issue12
dc.description.publisherscopeInternational
dc.description.sponsorsThis study was supported by the European Union’s Horizon 2020 Research and Innovation Program (grant 952512).
dc.description.volume108
dc.identifier.doi10.1097/TP.0000000000005048
dc.identifier.eissn1534-6080
dc.identifier.issn0041-1337
dc.identifier.quartileQ1
dc.identifier.scopus2-s2.0-85210364726
dc.identifier.urihttps://doi.org/10.1097/TP.0000000000005048
dc.identifier.urihttps://hdl.handle.net/20.500.14288/23161
dc.identifier.wos1369260500018
dc.keywordsArtificial intelligence
dc.keywordsClinical decision making
dc.keywordsClinical outcome
dc.keywordsDigitalization
dc.keywordsFederated learning
dc.keywordsHealth care cost
dc.keywordsHuman
dc.keywordsOrgan transplantation
dc.keywordsPrivacy
dc.keywordsReview
dc.keywordsTreatment outcome
dc.languageen
dc.publisherLippincott Williams and Wilkins
dc.sourceTransplantation
dc.subjectImmunology
dc.subjectSurgery
dc.subjectTransplantation
dc.titleNew tools for data harmonization and their potential applications in organ transplantation
dc.typeReview
dspace.entity.typePublication
local.contributor.kuauthorTabatabaei Hosseini, Seyed Amir
local.contributor.kuauthorKazemzadeh, Reza
local.contributor.kuauthorArpalı, Emre
local.contributor.kuauthorSüsal, Caner

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