Publication:
Communication theoretical modeling and analysis of tripartite synapses with astrocytes in synaptic molecular communication

dc.contributor.coauthorN/A
dc.contributor.departmentN/A
dc.contributor.departmentDepartment of Electrical and Electronics Engineering
dc.contributor.kuauthorKhan, Tooba
dc.contributor.kuauthorAkan, Özgür Barış
dc.contributor.kuprofilePhD Student
dc.contributor.kuprofileFaculty Member
dc.contributor.otherDepartment of Electrical and Electronics Engineering
dc.contributor.schoolcollegeinstituteGraduate School of Sciences and Engineering
dc.contributor.schoolcollegeinstituteCollege of Engineering
dc.contributor.yokidN/A
dc.contributor.yokid6647
dc.date.accessioned2024-11-09T23:53:18Z
dc.date.issued2022
dc.description.abstractAstrocytes, the most abundant glial cells in brain, being in physical proximity of pre- and postsynaptic terminals of the chemical synapse, form tripartite synapses. The feedback from astrocytes introduces synaptic plasticity, which modulates information transmission through neurons. Various other synaptic events also cause plasticity, hence combining them in a single model is quite challenging. In this paper, we study the combined effect of short-term depression (STD) and long-term potentiation (LTP) on vesicle release process in a tripartite synapse. STD decreases the release probability due to slower replenishment rates of releasable vesicles, whereas LTP is due to the positive feedback from astrocytes that increases release probability. Thus, we evaluate vesicle release probability and mutual information between input spikes and vesicle release to quantify the effects of STD and LTP on information transmission. Moreover, the effect of different synaptic parameters such as number of releasable vesicles, input spike rate and replenishment rate of the vesicles, is analyzed on information transmission. It is observed that release probability is predominantly affected by LTP, however, presence of STD decreases the achievable average mutual information over time. Furthermore, the synapses with higher number of releasable vesicles are observed to become stronger with time.
dc.description.indexedbyWoS
dc.description.indexedbyScopus
dc.description.issue3
dc.description.openaccessNO
dc.description.publisherscopeInternational
dc.description.sponsorshipAXA Chair
dc.description.sponsorshipERC Consolidator Grant MINERVA [ERC-2013-CoG 616922] This work was supported in part by the AXA Chair for Internet of Everything and in part by the ERC Consolidator Grant MINERVA under Grant ERC-2013-CoG 616922. The associate editor coordinating the review of this article and approving it for publication was J.-W. Choi.
dc.description.volume8
dc.identifier.doi10.1109/TMBMC.2022.3142621
dc.identifier.eissn2332-7804
dc.identifier.scopus2-s2.0-85139421971
dc.identifier.urihttp://dx.doi.org/10.1109/TMBMC.2022.3142621
dc.identifier.urihttps://hdl.handle.net/20.500.14288/14982
dc.identifier.wos861419500007
dc.keywordsNeurons
dc.keywordsSynapses
dc.keywordsCalcium
dc.keywordsNeurotransmitters
dc.keywordsInformation processing
dc.keywordsMISO communication
dc.keywordsDepression
dc.keywordsNanonetworks
dc.keywordsMolecular communication
dc.keywordsSynaptic plasticity
dc.keywordsTripartite synapse
dc.keywordsAstrocytes
dc.keywordsInformation capacity
dc.keywordsTransmitter release
dc.keywordsChannel
dc.keywordsTransmission
dc.keywordsDepression
dc.keywordsPlasticity
dc.languageEnglish
dc.publisherIEEE-Inst Electrical Electronics Engineers Inc
dc.sourceIEEE Transactions On Molecular Biological And Multi-Scale Communications
dc.subjectEngineering
dc.subjectElectrical and electronics engineering
dc.subjectTelecommunications
dc.titleCommunication theoretical modeling and analysis of tripartite synapses with astrocytes in synaptic molecular communication
dc.typeJournal Article
dspace.entity.typePublication
local.contributor.authoridN/A
local.contributor.authorid0000-0003-2523-3858
local.contributor.kuauthorKhan, Tooba
local.contributor.kuauthorAkan, Özgür Barış
relation.isOrgUnitOfPublication21598063-a7c5-420d-91ba-0cc9b2db0ea0
relation.isOrgUnitOfPublication.latestForDiscovery21598063-a7c5-420d-91ba-0cc9b2db0ea0

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