Publication:
Sis2 regulates yeast replicative lifespan in a dose-dependent manner

dc.contributor.coauthorMoreno, David F.
dc.contributor.coauthorLiu, Ping
dc.contributor.coauthorJohnson, Zane M.
dc.contributor.coauthorMcGinnis, Madeline M.
dc.contributor.coauthorTu, Benjamin P.
dc.contributor.coauthorHochstrasser, Mark
dc.contributor.departmentKUTTAM (Koç University Research Center for Translational Medicine)
dc.contributor.departmentSchool of Medicine
dc.contributor.kuauthorÖlmez, Tolga Tarkan
dc.contributor.kuauthorAcar, Murat
dc.contributor.schoolcollegeinstituteResearch Center
dc.contributor.schoolcollegeinstituteSCHOOL OF MEDICINE
dc.date.accessioned2025-03-06T20:59:34Z
dc.date.issued2023
dc.description.abstractApplication of microfluidic platforms facilitated high-precision measurements of yeast replicative lifespan (RLS);however, comparative quantification of lifespan across strain libraries has been missing. Here we microfluidically measure the RLS of 307 yeast strains, each deleted for a single gene. Despite previous reports of extended lifespan in these strains, we found that 56% of them did not actually live longer than the wild-type;while the remaining 44% showed extended lifespans, the degree of extension was often different from what was previously reported. Deletion of SIS2 gene led to the largest RLS increase observed. Sis2 regulated yeast lifespan in a dose-dependent manner, implying a role for the coenzyme A biosynthesis pathway in lifespan regulation. Introduction of the human PPCDC gene in the sis2 Delta background neutralized the lifespan extension. RNA-seq experiments revealed transcriptional increases in cell-cycle machinery components in sis2 Delta background. High-precision lifespan measurement will be essential to elucidate the gene network governing lifespan. Using a microfluidic single-cell aging platform, the authors report how single-cell lifespan varies across more than 300 yeast strains, each missing a single gene. Their top hit, Sis2, was found to regulate yeast lifespan in a dose-dependent fashion.
dc.description.indexedbyWOS
dc.description.indexedbyScopus
dc.description.indexedbyPubMed
dc.description.publisherscopeInternational
dc.description.sponsoredbyTubitakEuN/A
dc.description.sponsorshipWe thank Prof. Dr. J. Arino, Dr. E. Sarnoski, Prof. J. J. Collins and Acar Lab members for comments and feedback on various stages of this work, Prof. Dr. H-J. Schuller for kindly providing yeast strains, the Yale Center for Genome Analysis staff for preparing and sequencing the RNA-seq libraries, Dr. H. Baniasadi at UT Southwestern for help on running LC-MS samples, and Prof. Dr. M. Aldea for providing resources and lab space to D.F. Moreno while the Acar Lab was moving. T.T. Olmez and M. Acar gratefully acknowledge the use of the services and facilities of the Koc University Research Center for Translational Medicine (KUTTAM), funded by the Presidency of Turkey, Directorate of Strategy and Budget. This work was supported by the National Institute of General Medical Sciences of the National Institutes of Health under Award Number R01GM127870 to M. Acar.
dc.identifier.doi10.1038/s41467-023-43233-y
dc.identifier.eissn2041-1723
dc.identifier.grantnoU.S. Department of Health and Human Services | National Institutes of Health (NIH);Presidency of Turkey, Directorate of Strategy and Budget [R01GM127870];National Institute of General Medical Sciences of the National Institutes of Health
dc.identifier.issue1
dc.identifier.quartileQ1
dc.identifier.scopus2-s2.0-85178092420
dc.identifier.urihttps://doi.org/10.1038/s41467-023-43233-y
dc.identifier.urihttps://hdl.handle.net/20.500.14288/27743
dc.identifier.volume14
dc.identifier.wos1309983200004
dc.keywordsSis2
dc.keywordsYeast replicative lifespan
dc.keywordsDose
dc.language.isoeng
dc.publisherNature Portfolio
dc.relation.ispartofNature Communications
dc.subjectMultidisciplinary sciences
dc.titleSis2 regulates yeast replicative lifespan in a dose-dependent manner
dc.typeJournal Article
dspace.entity.typePublication
local.contributor.kuauthorÖlmez, Tolga Tarkan
local.contributor.kuauthorAcar, Murat
local.publication.orgunit1SCHOOL OF MEDICINE
local.publication.orgunit1Research Center
local.publication.orgunit2KUTTAM (Koç University Research Center for Translational Medicine)
local.publication.orgunit2School of Medicine
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