Publication:
Relation between kinetic conversion rates and anm mode frequencies

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dc.contributor.coauthorN/A
dc.contributor.departmentDepartment of Computer Engineering
dc.contributor.departmentDepartment of Chemical and Biological Engineering
dc.contributor.departmentGraduate School of Sciences and Engineering
dc.contributor.kuauthorGürsoy, Attila
dc.contributor.kuauthorKeskin, Özlem
dc.contributor.kuauthorÖzgür, Beytullah
dc.contributor.schoolcollegeinstituteCollege of Engineering
dc.contributor.schoolcollegeinstituteGRADUATE SCHOOL OF SCIENCES AND ENGINEERING
dc.date.accessioned2024-11-09T23:12:27Z
dc.date.issued2010
dc.description.abstractElastic Network Models (ENMs) are informative, fast and largely used techniques for the elucidation of the intrinsic motions of the proteins. ENM normal modes resemble the conformational changes in the ligand-free states of the proteins. According to pre-existing equilibrium model the native state of the protein forms an ensemble of substates and ligand simply selects and shifts the population dynamics of the ensemble. In this study, we investigated the relation between normal mode frequencies and kinetic conversion rates of ensemble substates between each other.
dc.description.indexedbyScopus
dc.description.openaccessYES
dc.description.publisherscopeInternational
dc.description.sponsoredbyTubitakEuN/A
dc.description.sponsorshipMiddle East Technical University
dc.description.sponsorshipInstitute of Electrical and Electronics Engineers (IEEE)
dc.description.sponsorshipTurkey Section
dc.identifier.doi10.1109/HIBIT.2010.5478902
dc.identifier.isbn9781-4244-5970-4
dc.identifier.quartileN/A
dc.identifier.scopus2-s2.0-77954465626
dc.identifier.urihttps://doi.org/10.1109/HIBIT.2010.5478902
dc.identifier.urihttps://hdl.handle.net/20.500.14288/9815
dc.keywordsConformational change
dc.keywordsConversion rates
dc.keywordsElastic network models
dc.keywordsEquilibrium models
dc.keywordsIntrinsic motions
dc.keywordsLigand-free
dc.keywordsMode frequencies
dc.keywordsNative state
dc.keywordsNormal modes
dc.keywordsNormal-mode frequencies
dc.keywordsBioinformatics
dc.keywordsLigands
dc.keywordsProteins
dc.language.isoeng
dc.publisherIEEE
dc.relation.ispartof2010 5th International Symposium on Health Informatics and Bioinformatics, HIBIT 2010
dc.subjectChemistry
dc.subjectComputer engineering
dc.titleRelation between kinetic conversion rates and anm mode frequencies
dc.typeConference Proceeding
dspace.entity.typePublication
local.contributor.kuauthorKeskin, Özlem
local.contributor.kuauthorGürsoy, Attila
local.contributor.kuauthorÖzgür, Beytullah
local.publication.orgunit1College of Engineering
local.publication.orgunit1GRADUATE SCHOOL OF SCIENCES AND ENGINEERING
local.publication.orgunit2Department of Chemical and Biological Engineering
local.publication.orgunit2Department of Computer Engineering
local.publication.orgunit2Graduate School of Sciences and Engineering
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