Publication:
Bridging the gap in Parkinson's disease research: from general pathophysiology to advanced 3d cell culture models

dc.contributor.departmentSchool of Medicine
dc.contributor.departmentKUH (Koç University Hospital)
dc.contributor.departmentGraduate School of Health Sciences
dc.contributor.departmentKUTTAM (Koç University Research Center for Translational Medicine)
dc.contributor.departmentDepartment of Molecular Biology and Genetics
dc.contributor.kuauthorKeleş, Buse
dc.contributor.kuauthorRumman, Baseerat
dc.contributor.kuauthorÖzdemir, Yasemin Gürsoy
dc.contributor.kuauthorÇakmak, Özgür Öztop
dc.contributor.kuauthorAkyoldaş, Göktuğ
dc.contributor.kuauthorErtan, Fatoş Sibel
dc.contributor.kuauthorSokullu, Emel
dc.contributor.kuauthorAl Samarie, Mohammed Abubaker Jassim
dc.contributor.schoolcollegeinstituteSCHOOL OF MEDICINE
dc.contributor.schoolcollegeinstituteResearch Center
dc.contributor.schoolcollegeinstituteGRADUATE SCHOOL OF HEALTH SCIENCES
dc.contributor.schoolcollegeinstituteKUH (KOÇ UNIVERSITY HOSPITAL)
dc.contributor.schoolcollegeinstituteCollege of Sciences
dc.date.accessioned2026-01-16T08:45:39Z
dc.date.available2026-01-16
dc.date.issued2025
dc.description.abstractParkinson's disease (PD) is the second most common neurodegenerative disorder, having a substantial negative impact on the quality of life of patients with its wide range of motor and non-motor symptoms. PD has a complex etiology involving aging, genetic, and environmental factors. The hallmark of the pathology in PD is the accumulation of misfolded alpha-synuclein, a presynaptic vesicle-associated protein, in dopaminergic neurons, causing neuronal death in the substantia nigra pars compacta (SNpc) and other brain regions. This review focuses on the main pathophysiological mechanisms of PD and in vitro cell culture models. Conventional 2-dimensional (2D) systems can not properly mimic living tissue and reflect disease pathology. On the other hand, 3-dimensional (3D) cell culture models bring an innovative perspective to PD research because they offer tissue-like 3D environments that support the functioning and viability of cells. The potential use of spheroids and organoid systems, 3D bio-printing, microfluidic systems, and organ-on-chip models is discussed in comparison with traditional approaches using 2D. These methods have great potential for more realistic simulation of the dynamics of the disease, allowing the investigation of therapeutic molecules and targets. This review synthesizes current knowledge on PD mechanisms and 3D in vitro models, and explains why 3D offers advantages over 2D for studying disease and testing therapies.
dc.description.fulltextYes
dc.description.harvestedfromManual
dc.description.indexedbyWOS
dc.description.indexedbyScopus
dc.description.indexedbyPubMed
dc.description.openaccessGold OA
dc.description.publisherscopeInternational
dc.description.readpublishN/A
dc.description.sponsoredbyTubitakEuN/A
dc.identifier.doi10.1186/s12964-025-02461-z
dc.identifier.eissn1478-811X
dc.identifier.embargoNo
dc.identifier.issue1
dc.identifier.pubmed41382222
dc.identifier.quartileQ1
dc.identifier.scopus2-s2.0-105024676978
dc.identifier.urihttps://doi.org/10.1186/s12964-025-02461-z
dc.identifier.urihttps://hdl.handle.net/20.500.14288/32034
dc.identifier.volume23
dc.identifier.wos001637712000001
dc.keywordsParkinson's disease
dc.keywordsPathophysiology of PD
dc.keywords3D cell culture
dc.keywordsCo-culture
dc.keywordsPD research
dc.language.isoeng
dc.publisherBMC
dc.relation.affiliationKoç University
dc.relation.collectionKoç University Institutional Repository
dc.relation.ispartofCell Communication and Signaling
dc.relation.openaccessYes
dc.rightsCC BY-NC-ND (Attribution-NonCommercial-NoDerivs)
dc.rights.urihttps://creativecommons.org/licenses/by-nc-nd/4.0/
dc.subjectCell Biology
dc.titleBridging the gap in Parkinson's disease research: from general pathophysiology to advanced 3d cell culture models
dc.typeReview
dspace.entity.typePublication
person.familyNameKeleş
person.familyNameRumman
person.familyNameÖzdemir
person.familyNameÇakmak
person.familyNameAkyoldaş
person.familyNameErtan
person.familyNameSokullu
person.familyNameAl Samarie
person.givenNameBuse
person.givenNameBaseerat
person.givenNameYasemin Gürsoy
person.givenNameÖzgür Öztop
person.givenNameGöktuğ
person.givenNameFatoş Sibel
person.givenNameEmel
person.givenNameMohammed Abubaker Jassim
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