Publication: Transient proteinprotein interactions
dc.contributor.coauthor | N/A | |
dc.contributor.department | Department of Computer Engineering | |
dc.contributor.department | Department of Chemical and Biological Engineering | |
dc.contributor.department | CCBB (The Center for Computational Biology and Bioinformatics) | |
dc.contributor.department | Graduate School of Sciences and Engineering | |
dc.contributor.kuauthor | Engin, Hatice Billur | |
dc.contributor.kuauthor | Gürsoy, Attila | |
dc.contributor.kuauthor | Keskin, Özlem | |
dc.contributor.kuauthor | Özbabacan, Saliha Ece Acuner | |
dc.contributor.schoolcollegeinstitute | College of Engineering | |
dc.contributor.schoolcollegeinstitute | GRADUATE SCHOOL OF SCIENCES AND ENGINEERING | |
dc.contributor.schoolcollegeinstitute | Research Center | |
dc.date.accessioned | 2024-11-10T00:04:39Z | |
dc.date.issued | 2011 | |
dc.description.abstract | Transient complexes are crucial for diverse biological processes such as biochemical pathways and signaling cascades in the cell. Here, we give an overview of the transient interactions; the importance of transient interactions as drug targets; and the structural characterization of transient proteinprotein complexes based on the geometrical and physicochemical features of the transient complexes' interfaces. To better understand and eventually design transient proteinprotein interactions (TPPIs), a molecular perspective of the proteinprotein interfaces is necessary. Obtaining high-quality structures of proteinprotein interactions could be one way of achieving this goal. After introducing the association kinetics of TPPIs, we elaborate on the experimental techniques detecting TPPIs in combination with the computational methods which classify transient and/or non-obligate complexes. In this review, currently available databases and servers that can be used to identify and predict TPPIs are also compiled. | |
dc.description.indexedby | WOS | |
dc.description.indexedby | Scopus | |
dc.description.indexedby | PubMed | |
dc.description.issue | 9 | |
dc.description.openaccess | YES | |
dc.description.sponsoredbyTubitakEu | N/A | |
dc.description.sponsorship | Scientific and Technological Research Council of Turkey [109T343, 109E207] | |
dc.description.sponsorship | Turkish Academy of Sciences (TUBA) This work was supported by the Scientific and Technological Research Council of Turkey Fellowship (Grant Numbers 109T343 and 109E207 to S.E.A.O. and H. B. E.) and Turkish Academy of Sciences (TUBA). | |
dc.description.volume | 24 | |
dc.identifier.doi | 10.1093/protein/gzr025 | |
dc.identifier.eissn | 1741-0134 | |
dc.identifier.issn | 1741-0126 | |
dc.identifier.scopus | 2-s2.0-80052326913 | |
dc.identifier.uri | https://doi.org/10.1093/protein/gzr025 | |
dc.identifier.uri | https://hdl.handle.net/20.500.14288/16308 | |
dc.identifier.wos | 294555600004 | |
dc.keywords | Protein interface | |
dc.keywords | Protein interaction types | |
dc.keywords | Transient protein | |
dc.keywords | Protein interactions | |
dc.keywords | Transient proteindrug Interactions | |
dc.keywords | Bimolecular | |
dc.keywords | Fluorescence complementation | |
dc.keywords | Magnetic-resonance-spectroscopy | |
dc.keywords | Molecular interaction database | |
dc.keywords | Interaction network database | |
dc.keywords | Nucleotide-exchange Factor | |
dc.keywords | Surface-plasmon resonance | |
dc.keywords | Transfer fret microscopy | |
dc.keywords | Drug discovery | |
dc.keywords | Mass-spectrometry | |
dc.keywords | Living cells | |
dc.language.iso | eng | |
dc.publisher | Oxford Univ Press | |
dc.relation.ispartof | Protein Engineering Design & Selection | |
dc.subject | Biochemistry and molecular biology | |
dc.subject | Biotechnology | |
dc.subject | Applied microbiology | |
dc.title | Transient proteinprotein interactions | |
dc.type | Review | |
dspace.entity.type | Publication | |
local.contributor.kuauthor | Özbabacan, Saliha Ece Acuner | |
local.contributor.kuauthor | Engin, Hatice Billur | |
local.contributor.kuauthor | Gürsoy, Attila | |
local.contributor.kuauthor | Keskin, Özlem | |
local.publication.orgunit1 | GRADUATE SCHOOL OF SCIENCES AND ENGINEERING | |
local.publication.orgunit1 | College of Engineering | |
local.publication.orgunit1 | Research Center | |
local.publication.orgunit2 | Department of Computer Engineering | |
local.publication.orgunit2 | Department of Chemical and Biological Engineering | |
local.publication.orgunit2 | CCBB (The Center for Computational Biology and Bioinformatics) | |
local.publication.orgunit2 | Graduate School of Sciences and Engineering | |
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