Publication:
End-to-end mathematical modeling of stress communication between plants

dc.contributor.departmentDepartment of Electrical and Electronics Engineering
dc.contributor.kuauthorKılıç, Ahmet Burak
dc.contributor.kuauthorAkan, Özgür Barış
dc.contributor.schoolcollegeinstituteCollege of Engineering
dc.date.accessioned2026-02-26T07:11:43Z
dc.date.available2026-02-25
dc.date.issued2026
dc.description.abstractMolecular Communication (MC) is a fundamental communication paradigm observed in nature. A notable subtype, Odor-based Molecular Communication (OMC), offers promising potential and a wide range of applications. In this study, we investigate OMC between plants in the context of stress communication, focusing on how plants emit Biological Volatile Organic Compounds (BVOCs) to convey information about experienced stress to neighboring plants. We present an end-to-end mathematical model that captures the physical and biological processes involved in plant-to-plant stress signaling. To the best of our knowledge, this is the first study to model stress communication in plants from transmission to reception. The system is analyzed numerically under various scenarios using MATLAB. Using experimental data from the literature, we show that BVOC emissions under different stress conditions can be approximated through a continuous gene regulation model. This model is applied to multiple stressors and plant species to simulate emission dynamics accurately. Additionally, we examine a modulation strategy observed in plants, known as Ratio Shift Keying, which enables the encoding of information in the relative concentrations of different BVOCs. This method limits the ability of competing plants to extract the transmitted information.
dc.description.fulltextNo
dc.description.harvestedfromManual
dc.description.indexedbyWOS
dc.description.indexedbyScopus
dc.description.openaccessN/A
dc.description.peerreviewstatusN/A
dc.description.publisherscopeInternational
dc.description.readpublishN/A
dc.description.sponsoredbyTubitakEuN/A
dc.description.sponsorshipThis work was supported in part by the AXA Research Fund (AXA Chair for Internet of Everything at KocUniversity). The associate editor coordinating the review of this article and approving it for publication was Y. Chen.
dc.description.versionN/A
dc.identifier.doi10.1109/TMBMC.2025.3626218
dc.identifier.eissn2332-7804
dc.identifier.embargoNo
dc.identifier.endpage78
dc.identifier.quartileQ3
dc.identifier.scopus2-s2.0-105020274868
dc.identifier.startpage69
dc.identifier.urihttps://doi.org/10.1109/TMBMC.2025.3626218
dc.identifier.urihttps://hdl.handle.net/20.500.14288/32423
dc.identifier.volume12
dc.identifier.wos001660766100002
dc.keywordsStress
dc.keywordsTransmitters
dc.keywordsMathematical models
dc.keywordsProduction
dc.keywordsMolecular communication
dc.keywordsPlants (biology)
dc.keywordsBiological system modeling
dc.keywordsReceivers
dc.keywordsVolatile organic compounds
dc.keywordsRegulators
dc.keywordsStress communication
dc.keywordsPlant communication
dc.keywordsBiological volatile organic compounds (BVOC)
dc.keywordsOlfactory communication
dc.keywordsMolecular communication
dc.keywordsRatio shift keying (RSK)
dc.keywordsConcentration shift keying (CSK)
dc.language.isoeng
dc.publisherIEEE
dc.relation.affiliationKoç University
dc.relation.collectionKoç University Institutional Repository
dc.relation.ispartofIEEE Transactions on Molecular, Biological, and Multi-Scale Communications
dc.relation.openaccessNo
dc.rightsCopyrighted
dc.subjectEngineering
dc.subjectTelecommunications
dc.titleEnd-to-end mathematical modeling of stress communication between plants
dc.typeJournal Article
dspace.entity.typePublication
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