Publication: Bayesian machine learning optimization of microneedle design for biological fluid sampling
dc.contributor.coauthor | Yetişen, Ali K. | |
dc.contributor.department | KUAR (KU Arçelik Research Center for Creative Industries) | |
dc.contributor.department | KUIS AI (Koç University & İş Bank Artificial Intelligence Center) | |
dc.contributor.department | KUTTAM (Koç University Research Center for Translational Medicine) | |
dc.contributor.department | Department of Chemical and Biological Engineering | |
dc.contributor.department | Department of Mechanical Engineering | |
dc.contributor.department | Graduate School of Sciences and Engineering | |
dc.contributor.kuauthor | Aydın, Erdal | |
dc.contributor.kuauthor | Tarar, Ceren | |
dc.contributor.kuauthor | Taşoğlu, Savaş | |
dc.contributor.schoolcollegeinstitute | Research Center | |
dc.contributor.schoolcollegeinstitute | College of Engineering | |
dc.contributor.schoolcollegeinstitute | GRADUATE SCHOOL OF SCIENCES AND ENGINEERING | |
dc.date.accessioned | 2024-12-29T09:39:48Z | |
dc.date.issued | 2023 | |
dc.description.abstract | The deployment of microneedles in biological fluid sampling and drug delivery is an emerging field in biotechnology, which contributes greatly to minimally-invasive methods in medicine. Prior studies on microneedles proposed designs based on the optimization of physical parameters through trial-and-error method. While these methods showed adequate results, it is possible to enhance the performance of a microneedle using a large dataset of parameters and their respective performance using advanced data analysis methods. Machine Learning (ML) offers the ability to mimic human learning behavior to expedite decision-making processes in biotechnology. In this study, the finite element analysis and ML models are combined to determine the optimal physical parameters for a microneedle design to maximize the amount of collected biological fluid. The fluid behavior in a microneedle patch is modeled using COMSOL Multiphysics (R), and the model is simulated with a set of initial physical and geometrical parameters in MATLAB (R) using LiveLink (TM). The mathematical model is used as the input to MATLAB's Bayesian Optimization function (bayesopt) and optimized for the maximum volumetric flow rate with pre-defined number of iterations. Within the parameter bounds, maximum volumetric flow rate is determined to be 21.16 mL min-1, which is 60% higher with respect to a system, where geometrical parameters are chosen randomly on average. This study introduces an online method for designing microneedles, where user can define the upper and lower bounds of the parameters to obtain an optimal design. The deployment of microneedles in biological fluid sampling and drug delivery is an emerging field in biotechnology, which contributes greatly to minimally-invasive methods in medicine. | |
dc.description.indexedby | WOS | |
dc.description.indexedby | Scopus | |
dc.description.issue | 4 | |
dc.description.openaccess | Gold Open Access | |
dc.description.publisherscope | International | |
dc.description.sponsoredbyTubitakEu | TÜBİTAK | |
dc.description.sponsorship | ST acknowledges TUBITAK 2232 International Fellowship for Outstanding Researchers Award (118C391), Alexander von Humboldt Research Fellowship for Experienced Researchers, Marie Sklodowska-Curie Individual Fellowship (101003361), and Royal Academy Newton-Katip Celebi Transforming Systems Through Partnership award for financial support of this research. Opinions, interpretations, conclusions, and recommendations are those of the author and are not necessarily endorsed by the TUEB & Idot;TAK. This work was partially supported by Science Academy's Young Scientist Awards Program (BAGEP), Outstanding Young Scientists Awards (GEBIP), and Bilim Kahramanlari Dernegi The Young Scientist Award. The authors have no other relevant affiliations or financial involvement with any organization or entity with a financial interest in or financial conflict with the subject matter or materials discussed in the manuscript apart from those disclosed. Some elements in Fig. 1 were designed using resources https://flaticon.com. | |
dc.description.volume | 2 | |
dc.identifier.doi | 10.1039/d3sd00103b | |
dc.identifier.eissn | 2635-0998 | |
dc.identifier.quartile | Q2 | |
dc.identifier.scopus | 2-s2.0-85169309119 | |
dc.identifier.uri | https://doi.org/10.1039/d3sd00103b | |
dc.identifier.uri | https://hdl.handle.net/20.500.14288/23106 | |
dc.identifier.wos | 1127544000001 | |
dc.keywords | Transdermal | |
dc.keywords | Microneedle | |
dc.keywords | Drug delivery system | |
dc.language.iso | eng | |
dc.publisher | Royal Soc Chemistry | |
dc.relation.grantno | TUBITAK 2232 International Fellowship for Outstanding Researchers Award [118C391] | |
dc.relation.grantno | Alexander von Humboldt Research Fellowship for Experienced Researchers, Marie Sklodowska-Curie Individual Fellowship [101003361] | |
dc.relation.grantno | Royal Academy Newton-Katip Celebi Transforming Systems Through Partnership award | |
dc.relation.grantno | Science Academy | |
dc.relation.ispartof | Sensors and Diagnostics | |
dc.subject | Analytical chemistry | |
dc.title | Bayesian machine learning optimization of microneedle design for biological fluid sampling | |
dc.type | Journal Article | |
dspace.entity.type | Publication | |
local.contributor.kuauthor | Tarar, Ceren | |
local.contributor.kuauthor | Aydın, Erdal | |
local.contributor.kuauthor | Taşoğlu, Savaş | |
local.publication.orgunit1 | GRADUATE SCHOOL OF SCIENCES AND ENGINEERING | |
local.publication.orgunit1 | Research Center | |
local.publication.orgunit2 | KUAR (KU Arçelik Research Center for Creative Industries) | |
local.publication.orgunit2 | Graduate School of Sciences and Engineering | |
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