Publication:
Modeling adsorption, conformation, and orientation of the Fis1 tail anchor at the mitochondrial outer membrane

dc.contributor.coauthorDunn, Cory D.
dc.contributor.departmentDepartment of Mechanical Engineering
dc.contributor.departmentGraduate School of Sciences and Engineering
dc.contributor.facultymemberYes
dc.contributor.kuauthorÖzgür, Beytullah
dc.contributor.kuauthorSayar, Mehmet
dc.contributor.schoolcollegeinstituteCollege of Engineering
dc.contributor.schoolcollegeinstituteGRADUATE SCHOOL OF SCIENCES AND ENGINEERING
dc.date.accessioned2024-11-09T23:59:30Z
dc.date.issued2022
dc.description.abstractProteins can be targeted to organellar membranes by using a tail anchor (TA), a stretch of hydrophobic amino acids found at the polypeptide carboxyl-terminus. The Fis1 protein (Fis1p), which promotes mitochondrial and peroxisomal division in the yeast Saccharomyces cerevisiae, is targeted to those organelles by its TA. Substantial evidence suggests that Fis1p insertion into the mitochondrial outer membrane can occur without the need for a translocation machinery. However, recent findings raise the possibility that Fis1p insertion into mitochondria might be promoted by a proteinaceous complex. Here, we have performed atomistic and coarse-grained molecular dynamics simulations to analyze the adsorption, conformation, and orientation of the Fis1(TA). Our results support stable insertion at the mitochondrial outer membrane in a monotopic, rather than a bitopic (transmembrane), configuration. Once inserted in the monotopic orientation, unassisted transition to the bitopic orientation is expected to be blocked by the highly charged nature of the TA carboxyl-terminus and by the Fis1p cytosolic domain. Our results are consistent with a model in which Fis1p does not require a translocation machinery for insertion at mitochondria.
dc.description.fulltextNo
dc.description.harvestedfromManual
dc.description.indexedbyWOS
dc.description.indexedbyScopus
dc.description.indexedbyPubMed
dc.description.openaccessYES
dc.description.peerreviewstatusN/A
dc.description.publisherscopeInternational
dc.description.readpublishN/A
dc.description.sponsoredbyTubitakEuTÜBİTAK
dc.description.sponsorshipScientific and Technological Research Council of Türkiye (TÜBİTAK) [120Z706]
dc.description.sponsorshipSigrid Juselius Foundation
dc.description.sponsorshipResearch Council of Finland [331556]
dc.description.sponsorshipJane and Aatos Erkko Foundation
dc.description.studentonlypublicationNo
dc.description.studentpublicationYes
dc.description.versionN/A
dc.identifier.WoSQuartileQ2
dc.identifier.doi10.3390/membranes12080752
dc.identifier.eissn2077-0375
dc.identifier.embargoN/A
dc.identifier.grantno120Z706
dc.identifier.grantno331556
dc.identifier.issue8
dc.identifier.pubmed36005667
dc.identifier.scopus2-s2.0-85137360333
dc.identifier.urihttps://doi.org/10.3390/membranes12080752
dc.identifier.urihttps://hdl.handle.net/20.500.14288/15651
dc.identifier.volume12
dc.identifier.wos000846548800001
dc.keywordsPeptide conformation
dc.keywordsMitochondria
dc.keywordsMitochondrial outer membrane
dc.keywordsTail anchor
dc.keywordsMolecular dynamics
dc.keywordsLipid membrane
dc.language.isoeng
dc.publisherMDPI
dc.relation.affiliationKoç University
dc.relation.collectionKoç University Institutional Repository
dc.relation.ispartofMembranes
dc.relation.openaccessN/A
dc.relation.projectTürdeş Olmayan Sistemlerde Uyarlanabilir Çözünürlük Simülasyon Yönteminin Geliştirilmesi
dc.rightsN/A
dc.subjectBiochemistry
dc.subjectMolecular biology
dc.subjectChemistry
dc.subjectChemical engineering
dc.subjectMaterials science
dc.subjectPolymer science
dc.titleModeling adsorption, conformation, and orientation of the Fis1 tail anchor at the mitochondrial outer membrane
dc.typeJournal Article
dspace.entity.typePublication
local.contributor.kuauthorÖzgür, Beytullah
local.contributor.kuauthorSayar, Mehmet
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