Publication:
Multi-class classification of thyroid nodules from automatic segmented ultrasound images: hybrid ResNet based UNet convolutional neural network approach

dc.contributor.coauthorKocadagli, Ozan
dc.contributor.coauthorYildirim, Duzgun
dc.contributor.coauthorMese, Ismail
dc.contributor.coauthorKovan, Ozge
dc.contributor.departmentDepartment of Computer Engineering
dc.contributor.kuauthorİnan, Neslihan Gökmen
dc.contributor.schoolcollegeinstituteCollege of Engineering
dc.date.accessioned2025-01-19T10:31:44Z
dc.date.issued2024
dc.description.abstractBackground and objectives: Early detection and diagnosis of thyroid nodule types are important because they can be treated more effectively in their early stages. The types of thyroid nodules are generally stated as atypia of undetermined significance/follicular lesion of undetermined significance (AUS/FLUS), benign follicular, and papillary follicular. The risk of malignancy for AUS/FLUS is typically stated to be between 5 and 15 %, while some studies indicate a risk as high as 25 %. Without complete histology, it is difficult to classify nodules and these diagnostic operations are pricey and risky. To minimize laborious workload and misdiagnosis, recently various AI-based decision support systems have been developed.Methods: In this study, a novel AI-based decision support system has been developed for the automated segmentation and classification of the types of thyroid nodules. This system is based on a hybrid deep-learning procedure that makes both an automatic thyroid nodule segmentation and classification tasks, respectively. In this framework, the segmentation is executed with some U-Net architectures such as ResUNet and ResUNet++ integrating with the feature extraction and upsampling with dropout operations to prevent overfitting. The nodule classification task is achieved by various deep nets architecture such as VGG-16, DenseNet121, ResNet50, and Inception ResNet-v2 considering some accurate classification criteria such as Intersection over Union (IOU), Dice coefficient, accuracy, precision, and recall.Results: In analysis, a total of 880 patients with ages ranging from 10 to 90 years were included by taking the ultrasound images and demographics. The experimental evaluations showed that ResUNet++ demonstrated excellent segmentation outcomes, attaining remarkable evaluation scores including a dice coefficient of 92.4 % and a mean IOU of 89.7 %. ResNet-50 and Inception ResNet-v2 trained over the images segmented with UNets have shown better performance in terms of achieving high evaluation scores for the classification accuracy such as 96.6 % and 95.0 %, respectively. In addition, ResNet-50 and Inception ResNet-v2 classified AUS/FLUS from the images segmented with UNets with AUC=97.0 % and 96.0 %, respectively.Conclusions: The proposed AI-based decision support system improves the automatic segmentation performance of AUS/FLUS and it has shown better performance than available approaches in the literature with respect to ACC, Jaccard and DICE losses. This system has great potential for clinical use by both radiologists and surgeons as well.
dc.description.indexedbyWOS
dc.description.indexedbyScopus
dc.description.indexedbyPubMed
dc.description.publisherscopeInternational
dc.description.sponsoredbyTubitakEuN/A
dc.description.volume243
dc.identifier.doi10.1016/j.cmpb.2023.107921
dc.identifier.eissn1872-7565
dc.identifier.issn0169-2607
dc.identifier.quartileQ1
dc.identifier.scopus2-s2.0-85176277793
dc.identifier.urihttps://doi.org/10.1016/j.cmpb.2023.107921
dc.identifier.urihttps://hdl.handle.net/20.500.14288/26273
dc.identifier.wos1114879900001
dc.keywordsThyroid nodule segmentation
dc.keywordsThyroid nodule classification
dc.keywordsDeep learning
dc.keywordsAUS/FLUS
dc.keywordsUNets
dc.keywordsResNets
dc.keywordsInterdisciplinary application
dc.language.isoeng
dc.publisherElsevier Ireland Ltd
dc.relation.ispartofComputer Methods and Programs in Biomedicine
dc.subjectComputer Science
dc.titleMulti-class classification of thyroid nodules from automatic segmented ultrasound images: hybrid ResNet based UNet convolutional neural network approach
dc.typeJournal Article
dspace.entity.typePublication
local.contributor.kuauthorİnan, Neslihan Gökmen
local.publication.orgunit1College of Engineering
local.publication.orgunit2Department of Computer Engineering
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relation.isOrgUnitOfPublication.latestForDiscovery89352e43-bf09-4ef4-82f6-6f9d0174ebae
relation.isParentOrgUnitOfPublication8e756b23-2d4a-4ce8-b1b3-62c794a8c164
relation.isParentOrgUnitOfPublication.latestForDiscovery8e756b23-2d4a-4ce8-b1b3-62c794a8c164

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