Publication:
B-tensor: brain connectome tensor factorization for Alzheimer's disease

dc.contributor.coauthorDurusoy, Goktekin
dc.contributor.coauthorYildirm, Zerrin
dc.contributor.coauthorDal, Demet Yuksel
dc.contributor.coauthorUlasoglu-Yildiz, Cigdem
dc.contributor.coauthorKurt, Elif
dc.contributor.coauthorBayir, Gunes
dc.contributor.coauthorOzacar, Erhan
dc.contributor.coauthorOzarslan, Evren
dc.contributor.coauthorDemirtas-Tatldede, Asl
dc.contributor.coauthorBilgic, Basar
dc.contributor.coauthorDemiralp, Tamer
dc.contributor.coauthorGurvit, Hakan
dc.contributor.coauthorAcar, Burak
dc.contributor.departmentDepartment of Physics
dc.contributor.kuauthorKabakçıoğlu, Alkan
dc.contributor.kuprofileFaculty Member
dc.contributor.otherDepartment of Physics
dc.contributor.schoolcollegeinstituteCollege of Sciences
dc.contributor.yokid49854
dc.date.accessioned2024-11-09T22:58:52Z
dc.date.issued2021
dc.description.abstractAD is the highly severe part of the dementia spectrum and impairs cognitive abilities of individuals, bringing economic, societal and psychological burdens beyond the diseased. A promising approach in AD research is the analysis of structural and functional brain connectomes, i.e., sNETs and fNETs, respectively. We propose to use tensor representation (B-tensor) of uni-modal and multi-modal brain connectomes to define a low-dimensional space via tensor factorization. We show on a cohort of 47 subjects, spanning the spectrum of dementia, that diagnosis with an accuracy of 77% to 100% is achievable in a 5D connectome space using different structural and functional connectome constructions in a uni-modal and multi-modal fashion. We further show that multi-modal tensor factorization improves the results suggesting complementary information in structure and function. A neurological assessment of the connectivity patterns identified largely agrees with prior knowledge, yet also suggests new associations that may play a role in the disease progress.
dc.description.indexedbyWoS
dc.description.indexedbyScopus
dc.description.indexedbyPubMed
dc.description.issue5
dc.description.openaccessYES
dc.description.publisherscopeInternational
dc.description.sponsoredbyTubitakEuN/A
dc.description.sponsorshipTurkish Directorate of Strategy and Budget under the TAM Project [2007K12-873]
dc.description.sponsorshipBogazici University Research Fund [16862]
dc.description.sponsorshipTUBITAK-ARDEB 1003 Programme [114E053] This work was supported by the Turkish Directorate of Strategy and Budget under the TAM Project number 2007K12-873, TUBITAK-ARDEB 1003 Programme under Grant #114E053, Bogazici University Research Fund Grant #16862.
dc.description.volume25
dc.identifier.doi10.1109/JBHi.2020.3023610
dc.identifier.eissn2168-2208
dc.identifier.issn2168-2194
dc.identifier.quartileQ1
dc.identifier.urihttp://dx.doi.org/10.1109/JBHi.2020.3023610
dc.identifier.urihttps://hdl.handle.net/20.500.14288/7777
dc.identifier.wos649625200025
dc.keywordsTensile stress
dc.keywordsDementia
dc.keywordsInformatics
dc.keywordsFunctional magnetic resonance imaging
dc.keywordsSociology
dc.keywordsStatistics
dc.keywordsBrain connectomes
dc.keywordsStructure and function
dc.keywordsTensor factorization
dc.keywordsDementia
dc.keywordsAlzheimer
dc.keywordsDisease
dc.keywordsFMRI
dc.keywordsDTI
dc.keywordsAssociation workgroups
dc.keywordsDiagnostic guidelines
dc.keywordsNational institute
dc.keywordsConnectivity
dc.keywordsRecommendations
dc.keywordsApproximations
dc.languageEnglish
dc.publisherInstitute of Electrical and Electronics Engineers (IEEE)
dc.sourceIEEE Journal of Biomedical and Health Informatics
dc.subjectComputer science
dc.subjectInformation systems
dc.subjectComputer science
dc.subjectInterdisciplinary applications
dc.subjectMathematical
dc.subjectComputational biology
dc.subjectMedical informatics
dc.titleB-tensor: brain connectome tensor factorization for Alzheimer's disease
dc.typeJournal Article
dspace.entity.typePublication
local.contributor.authorid0000-0002-9831-3632
local.contributor.kuauthorKabakçıoğlu, Alkan
relation.isOrgUnitOfPublicationc43d21f0-ae67-4f18-a338-bcaedd4b72a4
relation.isOrgUnitOfPublication.latestForDiscoveryc43d21f0-ae67-4f18-a338-bcaedd4b72a4

Files