Publication: Mimicking human neuronal pathways in silico: an emergent model on the effective connectivity
dc.contributor.coauthor | Gürcan, Önder | |
dc.contributor.coauthor | Mano, Jean-Pierre | |
dc.contributor.coauthor | Bernon, Carole | |
dc.contributor.coauthor | Dikenelli, Oğuz | |
dc.contributor.coauthor | Glize, Pierre | |
dc.contributor.kuauthor | Türker, Kemal Sıtkı | |
dc.contributor.kuprofile | Faculty Member | |
dc.contributor.schoolcollegeinstitute | School of Medicine | |
dc.contributor.yokid | 6741 | |
dc.date.accessioned | 2024-11-09T23:13:09Z | |
dc.date.issued | 2014 | |
dc.description.abstract | We present a novel computational model that detects temporal configurations of a given human neuronal pathway and constructs its artificial replication. This poses a great challenge since direct recordings from individual neurons are impossible in the human central nervous system and therefore the underlying neuronal pathway has to be considered as a black box. For tackling this challenge, we used a branch of complex systems modeling called artificial self-organization in which large sets of software entities interacting locally give rise to bottom-up collective behaviors. The result is an emergent model where each software entity represents an integrate-and-fire neuron. We then applied the model to the reflex responses of single motor units obtained from conscious human subjects. Experimental results show that the model recovers functionality of real human neuronal pathways by comparing it to appropriate surrogate data. What makes the model promising is the fact that, to the best of our knowledge, it is the first realistic model to self-wire an artificial neuronal network by efficiently combining neuroscience with artificial self-organization. Although there is no evidence yet of the model's connectivity mapping onto the human connectivity, we anticipate this model will help neuroscientists to learn much more about human neuronal networks, and could also be used for predicting hypotheses to lead future experiments. | |
dc.description.indexedby | WoS | |
dc.description.indexedby | Scopus | |
dc.description.issue | 2 | |
dc.description.openaccess | YES | |
dc.description.publisherscope | International | |
dc.description.sponsorship | Turkish Scientific and Technological Research Council (TUBITAK) [BAYG-2211] | |
dc.description.sponsorship | French Government Onder Gurcan is supported by the Turkish Scientific and Technological Research Council (TUBITAK) through a domestic PhD scholarship program (BAYG-2211) and the French Government through the cotutelle scholarship program. In addition, the authors would like to sincerely thank S. Utku Yavuz from Bernstein Center for Computational Neuroscience (BCCN) in Georg-August University for his technical support on the scientific data about the activity of human motoneurons and Serdar Korukoglu from Ege University Computer Engineering Department for his technical support on statistical analysis. Lastly, we would like to thank the reviewers for their constructive feedback and advice. | |
dc.description.volume | 36 | |
dc.identifier.doi | 10.1007/s10827-013-0467-3 | |
dc.identifier.eissn | 1573-6873 | |
dc.identifier.issn | 0929-5313 | |
dc.identifier.quartile | Q4 | |
dc.identifier.scopus | 2-s2.0-84896547933 | |
dc.identifier.uri | http://dx.doi.org/10.1007/s10827-013-0467-3 | |
dc.identifier.uri | https://hdl.handle.net/20.500.14288/9939 | |
dc.identifier.wos | 332952600007 | |
dc.keywords | Human studies | |
dc.keywords | Self-organization | |
dc.keywords | Agent-based simulation | |
dc.keywords | Spiking neural networks | |
dc.keywords | Integrate-and-fire model | |
dc.keywords | Frequency analysis | |
dc.keywords | Postsynaptic potentials | |
dc.keywords | Reflex responses | |
dc.keywords | Evoked-responses | |
dc.keywords | Network | |
dc.keywords | Optimization | |
dc.keywords | Motoneurons | |
dc.keywords | Amplitude | |
dc.keywords | Topology | |
dc.keywords | Walking | |
dc.language | English | |
dc.publisher | Springer | |
dc.source | Journal of Computational Neuroscience | |
dc.subject | Mathematics | |
dc.subject | Computational biology | |
dc.subject | Neurosciences | |
dc.title | Mimicking human neuronal pathways in silico: an emergent model on the effective connectivity | |
dc.type | Journal Article | |
dspace.entity.type | Publication | |
local.contributor.authorid | 0000-0001-9962-075X | |
local.contributor.kuauthor | Türker, Kemal Sıtkı |