Publication:
Mimicking human neuronal pathways in silico: an emergent model on the effective connectivity

dc.contributor.coauthorGürcan, Önder
dc.contributor.coauthorMano, Jean-Pierre
dc.contributor.coauthorBernon, Carole
dc.contributor.coauthorDikenelli, Oğuz
dc.contributor.coauthorGlize, Pierre
dc.contributor.kuauthorTürker, Kemal Sıtkı
dc.contributor.kuprofileFaculty Member
dc.contributor.schoolcollegeinstituteSchool of Medicine
dc.contributor.yokid6741
dc.date.accessioned2024-11-09T23:13:09Z
dc.date.issued2014
dc.description.abstractWe present a novel computational model that detects temporal configurations of a given human neuronal pathway and constructs its artificial replication. This poses a great challenge since direct recordings from individual neurons are impossible in the human central nervous system and therefore the underlying neuronal pathway has to be considered as a black box. For tackling this challenge, we used a branch of complex systems modeling called artificial self-organization in which large sets of software entities interacting locally give rise to bottom-up collective behaviors. The result is an emergent model where each software entity represents an integrate-and-fire neuron. We then applied the model to the reflex responses of single motor units obtained from conscious human subjects. Experimental results show that the model recovers functionality of real human neuronal pathways by comparing it to appropriate surrogate data. What makes the model promising is the fact that, to the best of our knowledge, it is the first realistic model to self-wire an artificial neuronal network by efficiently combining neuroscience with artificial self-organization. Although there is no evidence yet of the model's connectivity mapping onto the human connectivity, we anticipate this model will help neuroscientists to learn much more about human neuronal networks, and could also be used for predicting hypotheses to lead future experiments.
dc.description.indexedbyWoS
dc.description.indexedbyScopus
dc.description.issue2
dc.description.openaccessYES
dc.description.publisherscopeInternational
dc.description.sponsorshipTurkish Scientific and Technological Research Council (TUBITAK) [BAYG-2211]
dc.description.sponsorshipFrench Government Onder Gurcan is supported by the Turkish Scientific and Technological Research Council (TUBITAK) through a domestic PhD scholarship program (BAYG-2211) and the French Government through the cotutelle scholarship program. In addition, the authors would like to sincerely thank S. Utku Yavuz from Bernstein Center for Computational Neuroscience (BCCN) in Georg-August University for his technical support on the scientific data about the activity of human motoneurons and Serdar Korukoglu from Ege University Computer Engineering Department for his technical support on statistical analysis. Lastly, we would like to thank the reviewers for their constructive feedback and advice.
dc.description.volume36
dc.identifier.doi10.1007/s10827-013-0467-3
dc.identifier.eissn1573-6873
dc.identifier.issn0929-5313
dc.identifier.quartileQ4
dc.identifier.scopus2-s2.0-84896547933
dc.identifier.urihttp://dx.doi.org/10.1007/s10827-013-0467-3
dc.identifier.urihttps://hdl.handle.net/20.500.14288/9939
dc.identifier.wos332952600007
dc.keywordsHuman studies
dc.keywordsSelf-organization
dc.keywordsAgent-based simulation
dc.keywordsSpiking neural networks
dc.keywordsIntegrate-and-fire model
dc.keywordsFrequency analysis
dc.keywordsPostsynaptic potentials
dc.keywordsReflex responses
dc.keywordsEvoked-responses
dc.keywordsNetwork
dc.keywordsOptimization
dc.keywordsMotoneurons
dc.keywordsAmplitude
dc.keywordsTopology
dc.keywordsWalking
dc.languageEnglish
dc.publisherSpringer
dc.sourceJournal of Computational Neuroscience
dc.subjectMathematics
dc.subjectComputational biology
dc.subjectNeurosciences
dc.titleMimicking human neuronal pathways in silico: an emergent model on the effective connectivity
dc.typeJournal Article
dspace.entity.typePublication
local.contributor.authorid0000-0001-9962-075X
local.contributor.kuauthorTürker, Kemal Sıtkı

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