Publication:
Myocardial biomechanics and the consequent differentially expressed genes of the left atrial ligation chick embryonic model of hypoplastic left heart syndrome

dc.contributor.coauthorChan, Wei Xuan
dc.contributor.coauthorMotakis, Efthymios
dc.contributor.coauthorHo, Sheldon
dc.contributor.coauthorYap, Choon Hwai
dc.contributor.coauthorLashkarinia, S. Samaneh
dc.contributor.departmentDepartment of Mechanical Engineering
dc.contributor.kuauthorSiddiqui, Hummaira Banu
dc.contributor.kuauthorÇoban, Mervenur
dc.contributor.kuauthorSevgin, Börteçine
dc.contributor.kuauthorPekkan, Kerem
dc.contributor.otherDepartment of Mechanical Engineering
dc.contributor.schoolcollegeinstituteCollege of Engineering
dc.contributor.schoolcollegeinstituteGraduate School of Sciences and Engineering
dc.date.accessioned2024-12-29T09:36:22Z
dc.date.issued2023
dc.description.abstractLeft atrial ligation (LAL) of the chick embryonic heart is a model of the hypoplastic left heart syndrome (HLHS) where a purely mechanical intervention without genetic or pharmacological manipulation is employed to initiate cardiac malformation. It is thus a key model for understanding the biomechanical origins of HLHS. However, its myocardial mechanics and subsequent gene expressions are not well-understood. We performed finite element (FE) modeling and single-cell RNA sequencing to address this. 4D high-frequency ultrasound imaging of chick embryonic hearts at HH25 (ED 4.5) were obtained for both LAL and control. Motion tracking was performed to quantify strains. Image-based FE modeling was conducted, using the direction of the smallest strain eigenvector as the orientations of contractions, the Guccione active tension model and a Fung-type transversely isotropic passive stiffness model that was determined via micro-pipette aspiration. Single-cell RNA sequencing of left ventricle (LV) heart tissues was performed for normal and LAL embryos at HH30 (ED 6.5) and differentially expressed genes (DEG) were identified.After LAL, LV thickness increased by 33%, strains in the myofiber direction increased by 42%, while stresses in the myofiber direction decreased by 50%. These were likely related to the reduction in ventricular preload and underloading of the LV due to LAL. RNA-seq data revealed potentially related DEG in myocytes, including mechano-sensing genes (Cadherins, NOTCH1, etc.), myosin contractility genes (MLCK, MLCP, etc.), calcium signaling genes (PI3K, PMCA, etc.), and genes related to fibrosis and fibroelastosis (TGF-beta, BMP, etc.). We elucidated the changes to the myocardial biomechanics brought by LAL and the corresponding changes to myocyte gene expressions. These data may be useful in identifying the mechanobiological pathways of HLHS.
dc.description.indexedbyWoS
dc.description.indexedbyScopus
dc.description.indexedbyPubMed
dc.description.issue5
dc.description.openaccessGreen Published, hybrid
dc.description.publisherscopeInternational
dc.description.sponsorsThis work was supported by Royal Society Newton International Fellowship funded under the Newton Fund (NIF\R1\202197), and Imperial College Startup funding (PI: Yap).
dc.description.volume51
dc.identifier.doi10.1007/s10439-023-03187-0
dc.identifier.eissn1573-9686
dc.identifier.issn0090-6964
dc.identifier.quartileQ3
dc.identifier.scopus2-s2.0-85152140273
dc.identifier.urihttps://doi.org/10.1007/s10439-023-03187-0
dc.identifier.urihttps://hdl.handle.net/20.500.14288/22023
dc.identifier.wos966307000001
dc.keywordsEmbryonic heart
dc.keywordsBiomechanics
dc.keywordsHypoplastic left heart syndrome
dc.keywordsMechanobiology
dc.keywordsSingle-cell RNA sequencing
dc.languageen
dc.publisherSpringer
dc.relation.grantnoRoyal Society [NIF\R1\202197]
dc.relation.grantnoImperial College
dc.sourceAnnals of Biomedical Engineering
dc.subjectEngineering
dc.subjectBiomedical
dc.titleMyocardial biomechanics and the consequent differentially expressed genes of the left atrial ligation chick embryonic model of hypoplastic left heart syndrome
dc.typeJournal article
dspace.entity.typePublication
local.contributor.kuauthorSiddiqui, Hummaira Banu
local.contributor.kuauthorÇoban, Mervenur
local.contributor.kuauthorSevgin, Börteçine
local.contributor.kuauthorPekkan, Kerem
relation.isOrgUnitOfPublicationba2836f3-206d-4724-918c-f598f0086a36
relation.isOrgUnitOfPublication.latestForDiscoveryba2836f3-206d-4724-918c-f598f0086a36

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