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Novel ALK immunohistochemistry assay (clone OTI1A4, Dako) is a sensitive, reliable marker for identifying ALK rearrangements in lung adenocarcinomas : a validation study

dc.contributor.coauthorBozkurtlar, Emine
dc.contributor.departmentKUTTAM (Koç University Research Center for Translational Medicine)
dc.contributor.departmentKUISCID (Koç University İşbank Center for Infectious Diseases)
dc.contributor.departmentSchool of Medicine
dc.contributor.kuauthorBulutay, Pınar
dc.contributor.kuauthorEren, Özgür Can
dc.contributor.kuauthorBaygül, Arzu Eden
dc.contributor.kuauthorKulaç, İbrahim
dc.contributor.kuauthorMeriçöz, Çisel Aydın
dc.contributor.schoolcollegeinstituteResearch Center
dc.contributor.schoolcollegeinstituteSCHOOL OF MEDICINE
dc.date.accessioned2025-01-19T10:30:40Z
dc.date.issued2023
dc.description.abstractObjectives We present the first study validating the recent Dako ALK assay (clone OTI1A4, in vitro diagnostic) for detecting ALK rearrangements in lung adenocarcinoma.Methods Lung adenocarcinoma cases between 2011 and 2023 were retrospectively collected to create a cohort of 203 samples. Cases were stained with Dako ALK OTI1A4 and Ventana ALK D5F3 and reviewed by 3 pathologists independently. Correlation between assays, including their sensitivity and specificity, was evaluated.Results The cohort (n = 203) consisted of resections, core needle biopsies, and cell blocks. Agreement between Dako ALK OTI1A4 and Ventana ALK D5F3 assays was "almost perfect," with & kappa; = 0.89. The sensitivity and specificity of the Dako ALK OTI1A4 assay were 93.3% and 96%, respectively, in a subgroup of 55 molecularly confirmed cases (n = 30 with and n = 25 without ALK rearrangement).Conclusions Immunohistochemistry-based assays provide a valid and reasonably priced alternative, especially in settings where molecular confirmatory tests are neither offered nor accessible. Given high interassay and molecular concordance, we propose that the novel Dako OTI1A4 assay can be reliably used to identify cases with ALK rearrangement.
dc.description.indexedbyWOS
dc.description.indexedbyScopus
dc.description.indexedbyPubMed
dc.description.issue1
dc.description.openaccesshybrid
dc.description.publisherscopeInternational
dc.description.sponsoredbyTubitakEuN/A
dc.description.sponsorshipThis study will be presented as a platform presentation at the European Society of Pathology Annual Meeting; September 9-13, 2023; Dublin, Ireland.
dc.description.volume161
dc.identifier.doi10.1093/ajcp/aqad111
dc.identifier.eissn1943-7722
dc.identifier.issn0002-9173
dc.identifier.quartileQ2
dc.identifier.scopus2-s2.0-85181760859
dc.identifier.urihttps://doi.org/10.1093/ajcp/aqad111
dc.identifier.urihttps://hdl.handle.net/20.500.14288/26085
dc.identifier.wos1060980600001
dc.keywordsLung adenocarcinoma
dc.keywordsImmunohistochemistry
dc.keywordsValidation
dc.keywordsPredictive testing
dc.language.isoeng
dc.publisherOxford University Press
dc.relation.grantnoThis study will be presented as a platform presentation at the European Society of Pathology Annual Meeting; September 9-13, 2023; Dublin, Ireland.; Dublin, Ireland
dc.relation.ispartofAmerican Journal of Clinical Pathology
dc.subjectPathology
dc.titleNovel ALK immunohistochemistry assay (clone OTI1A4, Dako) is a sensitive, reliable marker for identifying ALK rearrangements in lung adenocarcinomas : a validation study
dc.typeJournal Article
dspace.entity.typePublication
local.contributor.kuauthorEren, Özgür Can
local.contributor.kuauthorMeriçöz, Çisel Aydın
local.contributor.kuauthorBulutay, Pınar
local.contributor.kuauthorBaygül, Arzu Eden
local.contributor.kuauthorKulaç, İbrahim
local.publication.orgunit1SCHOOL OF MEDICINE
local.publication.orgunit1Research Center
local.publication.orgunit2KUISCID (Koç University İşbank Center for Infectious Diseases)
local.publication.orgunit2KUTTAM (Koç University Research Center for Translational Medicine)
local.publication.orgunit2School of Medicine
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