Bridging the gap between gut microbiota and Alzheimer's Disease: a metaproteomic approach for biomarker discovery in transgenic mice

dc.contributor.authoridN/A
dc.contributor.authorid0000-0002-9135-5397
dc.contributor.coauthorSerdar, Muhittin Abdulkadir
dc.contributor.coauthorPalermo, Francesca
dc.contributor.coauthorBaykal, Ahmet Tarik
dc.contributor.departmentN/A
dc.contributor.departmentDepartment of Molecular Biology and Genetics
dc.contributor.kuauthorAyan, Esra
dc.contributor.kuauthorDemirci, Hasan
dc.contributor.kuprofilePhD Student
dc.contributor.kuprofileFaculty Member
dc.contributor.researchcenterKoç Üniversitesi İş Bankası Enfeksiyon Hastalıkları Uygulama ve Araştırma Merkezi (EHAM) / Koç University İşbank Center for Infectious Diseases (KU-IS CID)
dc.contributor.schoolcollegeinstituteGraduate School of Sciences and Engineering
dc.contributor.schoolcollegeinstituteCollege of Sciences
dc.contributor.yokidN/A
dc.contributor.yokid307350
dc.date.accessioned2025-01-19T10:28:32Z
dc.date.issued2023
dc.description.abstractAlzheimer's Disease (AD) is a progressively debilitating form of dementia that affects millions of individuals worldwide. Although a vast amount of research has investigated the complex interplay between gut microbiota and neurodegeneration, the metaproteomic effects of microbiota on AD pathogenesis remain largely uncharted territory. This study aims to reveal the role of gut microbiota in AD pathogenesis, particularly regarding changes in the proteome and molecular pathways that are intricately linked to disease progression. We operated state-of-the-art Nano-Liquid Chromatography Mass Spectrometry (nLC-MS/MS) to compare the metaproteomic shifts of 3-month-old transgenic (3M-ALZ) and control (3M-ALM, Alzheimer's Littermate) mice, depicting the early onset of AD with those of 12-month-old ALZ and ALM mice displaying the late stage of AD. Combined with computational analysis, the outcomes of the gut-brain axis-focused inquiry furnish priceless knowledge regarding the intersection of gut microbiota and AD. Accordingly, our data indicate that the microbiota, proteome, and molecular changes in the intestine arise long before the manifestation of disease symptoms. Moreover, disparities exist between the normal-aged flora and the gut microbiota of late-stage AD mice, underscoring that the identified vital phyla, proteins, and pathways hold immense potential as markers for the early and late stages of AD. Our research endeavors to offer a comprehensive inquiry into the intricate interplay between gut microbiota and Alzheimer's Disease utilizing metaproteomic approaches, which have not been widely adopted in this domain. This highlights the exigency for further scientific exploration to elucidate the underlying mechanisms that govern this complex and multifaceted linkage.
dc.description.indexedbyWoS
dc.description.indexedbyScopus
dc.description.indexedbyPubMed
dc.description.issue16
dc.description.openaccessGreen Published, gold
dc.description.publisherscopeInternational
dc.description.sponsorsThe authors dedicate this manuscript to the memory of Albert E. Dahlberg and Nizar Turker. The authors gratefully acknowledge the use of the services and facilities of the Acibadem Labmed.
dc.description.volume24
dc.identifier.doi10.3390/ijms241612819
dc.identifier.eissn1422-0067
dc.identifier.issn1661-6596
dc.identifier.quartileQ1
dc.identifier.scopus2-s2.0-85168751228
dc.identifier.urihttps://doi.org/10.3390/ijms241612819
dc.identifier.urihttps://hdl.handle.net/20.500.14288/25743
dc.identifier.wos1057086600001
dc.keywordsNeurodegeneration
dc.keywordsAlzheimer's Disease
dc.keywordsProteomics
dc.keywordsMetaproteomics
dc.keywordsGut microbiota
dc.keywords5xFAD mice
dc.languageen
dc.publisherMultidisciplinary Digital Publishing Institute (MDPI)
dc.relation.grantnoThe authors dedicate this manuscript to the memory of Albert E. Dahlberg and Nizar Turker. The authors gratefully acknowledge the use of the services and facilities of the Acibadem Labmed.; Acibadem Labmed
dc.sourceInternational Journal of Molecular Sciences
dc.subjectBiochemistry and molecular biology
dc.subjectChemistry, multidisciplinary
dc.titleBridging the gap between gut microbiota and Alzheimer's Disease: a metaproteomic approach for biomarker discovery in transgenic mice
dc.typeJournal Article

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