Publication:
Information theoretical analysis of synaptic communication for nanonetworks

dc.contributor.coauthorN/A
dc.contributor.departmentDepartment of Electrical and Electronics Engineering
dc.contributor.departmentGraduate School of Sciences and Engineering
dc.contributor.kuauthorAkan, Özgür Barış
dc.contributor.kuauthorKhan, Tooba
dc.contributor.kuauthorRamezani, Hamideh
dc.contributor.schoolcollegeinstituteCollege of Engineering
dc.contributor.schoolcollegeinstituteGRADUATE SCHOOL OF SCIENCES AND ENGINEERING
dc.date.accessioned2024-11-09T23:38:59Z
dc.date.issued2018
dc.description.abstractCommunication among neurons is the highly evolved and efficient nanoscale communication paradigm, hence the most promising technique for biocompatible nanonetworks. This necessitates the understanding of neuro-spike communication from information theoretical perspective to reach a reference model for nanonetworks. This would also contribute towards developing ICT-based diagnostics techniques for neuro-degenerative diseases. Thus, in this paper, we focus on the fundamental building block of neuro-spike communication, i.e., signal transmission over a synapse, to evaluate its information transfer rate. We aim to analyze a realistic synaptic communication model, which for the first time, encompasses the variation in vesicle release probability with time, synaptic geometry and the re-uptake of neurotransmitters by pre-synaptic terminal. To achieve this objective, we formulate the mutual information between input and output of the synapse. Then, since this communication paradigm has memory, we evaluate the average mutual information over multiple transmissions to find its overall capacity. We derive a closed-form expression for the capacity of the synaptic communication as well as calculate the capacity-achieving input probability distribution. Finally, we find the effects of variation in different synaptic parameters on the information capacity and prove that the diffusion process does not decrease the information a neural response carries about the stimulus in real scenario.
dc.description.indexedbyWOS
dc.description.indexedbyScopus
dc.description.openaccessNO
dc.description.publisherscopeInternational
dc.description.sponsoredbyTubitakEuN/A
dc.description.sponsorshipERC project MINERVA (ERC-2013-CoG) [616922]
dc.description.sponsorshipEU project CIRCLE (EU-H2020FET-Open) [665564]
dc.description.sponsorshipTUB.ITAK graduate scholarship program [BIDEB-2215] This work was supported in part by ERC project MINERVA (ERC-2013-CoG #616922), EU project CIRCLE (EU-H2020FET-Open #665564), and TUB.ITAK graduate scholarship program (BIDEB-2215).
dc.identifier.isbn978-1-5386-4128-6
dc.identifier.issn0743-166X
dc.identifier.quartileN/A
dc.identifier.scopus2-s2.0-85051202178
dc.identifier.urihttps://hdl.handle.net/20.500.14288/13039
dc.identifier.wos509768900260
dc.keywordsNanonetworks
dc.keywordsMolecular communication
dc.keywordsNeuro-spike communication
dc.keywordsInformation capacity
dc.keywordsSynaptic transmission
dc.keywordsTransmission
dc.keywordsOrobability
dc.keywordsDepression
dc.keywordsDiffusion
dc.keywordsDepletion
dc.keywordsMobility
dc.keywordsChannel
dc.keywordsModel
dc.language.isoeng
dc.publisherInstitute of Electrical and Electronics Engineers (IEEE)
dc.relation.ispartofIEEE Conference On Computer Communications (IEEE Infocom 2018)
dc.subjectComputer science
dc.subjectHardware and architecture
dc.subjectEngineering
dc.subjectElectrical and electronic engineering
dc.subjectTelecommunications
dc.titleInformation theoretical analysis of synaptic communication for nanonetworks
dc.typeConference Proceeding
dspace.entity.typePublication
local.contributor.kuauthorRamezani, Hamideh
local.contributor.kuauthorKhan, Tooba
local.contributor.kuauthorAkan, Özgür Barış
local.publication.orgunit1GRADUATE SCHOOL OF SCIENCES AND ENGINEERING
local.publication.orgunit1College of Engineering
local.publication.orgunit2Department of Electrical and Electronics Engineering
local.publication.orgunit2Graduate School of Sciences and Engineering
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