Publication:
Glu-370 in the large subunit influences the substrate binding, allosteric, and heat stability properties of potato ADP-glucose pyrophosphorylase

dc.contributor.coauthorÇalışkan, Mahmut
dc.contributor.coauthorCevahir, Gül
dc.contributor.departmentN/A
dc.contributor.departmentDepartment of Chemical and Biological Engineering
dc.contributor.departmentN/A
dc.contributor.departmentDepartment of Molecular Biology and Genetics
dc.contributor.departmentN/A
dc.contributor.departmentDepartment of Chemical and Biological Engineering
dc.contributor.kuauthorSeferoğlu, Ayşe Bengisu
dc.contributor.kuauthorGül, Şeref
dc.contributor.kuauthorDikbaş, Uğur Meriç
dc.contributor.kuauthorBarış, İbrahim
dc.contributor.kuauthorKoper, Kaan
dc.contributor.kuauthorKavaklı, İbrahim Halil
dc.contributor.kuprofilePhD Student
dc.contributor.kuprofileResearcher
dc.contributor.kuprofileMaster Student
dc.contributor.kuprofileTeaching Faculty
dc.contributor.kuprofileMaster Student
dc.contributor.kuprofileFaculty Member
dc.contributor.otherDepartment of Molecular Biology and Genetics
dc.contributor.otherDepartment of Chemical and Biological Engineering
dc.contributor.schoolcollegeinstituteGraduate School of Sciences and Engineering
dc.contributor.schoolcollegeinstituteCollege of Engineering
dc.contributor.schoolcollegeinstituteGraduate School of Sciences and Engineering
dc.contributor.schoolcollegeinstituteCollege of Sciences
dc.contributor.schoolcollegeinstituteGraduate School of Sciences and Engineering
dc.contributor.schoolcollegeinstituteCollege of Engineering
dc.contributor.yokidN/A
dc.contributor.yokid289253
dc.contributor.yokidN/A
dc.contributor.yokid111629
dc.contributor.yokidN/A
dc.contributor.yokid40319
dc.date.accessioned2024-11-09T23:50:59Z
dc.date.issued2016
dc.description.abstractADP-glucose pyrophosphorylase (AGPase) is a key allosteric enzyme in plant starch biosynthesis. Plant AGPase is a heterotetrameric enzyme that consists of large (LS) and small subunits (SS), which are encoded by two different genes. In this study, we showed that the conversion of Glu to Gly at position 370 in the LS of AGPase alters the heterotetrameric stability along with the binding properties of substrate and effectors of the enzyme. Kinetic analyses revealed that the affinity of the (LSSSWT)-S-E370G AGPase for glucose 1-phosphate is 3-fold less than for wild type (WT) AGPase. Additionally, the (LSSSWT)-S-E370G AGPase requires 3-fold more 3-phosphogyceric acid to be activated. Finally, the LS(E370G)SS(WT)AGPase is less heat stable compared with the WT AGPase. Computational analysis of the mutant Gly-370 in the 3D modeled LS AGPase showed that this residue changes charge distribution of the surface and thus affect stability of the LS AGPase and overall heat stability of the heterotetrameric AGPase. In summary, our results show that LSE370 intricately modulate the heat stability and enzymatic activity of potato the AGPase.
dc.description.indexedbyWoS
dc.description.indexedbyScopus
dc.description.indexedbyPubMed
dc.description.openaccessYES
dc.description.publisherscopeInternational
dc.description.sponsorshipTUBITAK-KBAG [114Z760]
dc.description.sponsorshipTUBITAK-BIDEP [2211] This work was supported by TUBITAK-KBAG 114Z760
dc.description.sponsorshipTUBITAK-BIDEP 2211 [PhD fellowship of A.B.S].
dc.description.volume252
dc.identifier.doi10.1016/j.plantsci.2016.07.007
dc.identifier.eissn1873-2259
dc.identifier.issn0168-9452
dc.identifier.scopus2-s2.0-84979544370
dc.identifier.urihttp://dx.doi.org/10.1016/j.plantsci.2016.07.007
dc.identifier.urihttps://hdl.handle.net/20.500.14288/14637
dc.identifier.wos386410000012
dc.keywordsADP-Glucose pyrophosphorylase
dc.keywordsAllosteric regulation
dc.keywordsProtein stability
dc.keywordsStarch biosynthesis
dc.keywordsCatalytic-properties
dc.keywordsSolanum-tuberosum
dc.keywordsWeb server
dc.keywordsN-Terminus
dc.keywordsStarch
dc.keywordsExpression
dc.keywordsPurification
dc.keywordsMutation
dc.keywordsPrediction
dc.keywordsProteins
dc.languageEnglish
dc.publisherElsevier Ireland Ltd
dc.sourcePlant Science
dc.subjectBiochemistry
dc.subjectMolecular biology
dc.subjectPlant engineering
dc.titleGlu-370 in the large subunit influences the substrate binding, allosteric, and heat stability properties of potato ADP-glucose pyrophosphorylase
dc.typeJournal Article
dspace.entity.typePublication
local.contributor.authorid0000-0003-3900-4300
local.contributor.authorid0000-0002-5613-1339
local.contributor.authorid0000-0002-6988-6319
local.contributor.authorid0000-0003-2185-3259
local.contributor.authoridN/A
local.contributor.authorid0000-0001-6624-3505
local.contributor.kuauthorSeferoğlu, Ayşe Bengisu
local.contributor.kuauthorGül, Şeref
local.contributor.kuauthorDikbaş, Uğur Meriç
local.contributor.kuauthorBarış, İbrahim
local.contributor.kuauthorKoper, Kaan
local.contributor.kuauthorKavaklı, İbrahim Halil
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relation.isOrgUnitOfPublication.latestForDiscoveryaee2d329-aabe-4b58-ba67-09dbf8575547

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