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Permanent URI for this collectionhttps://hdl.handle.net/20.500.14288/3
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Publication Metadata only Optimizing photonic devices under fabrication variations with deep photonic networks(SPIE-Int Soc Optical Engineering, 2024) Department of Electrical and Electronics Engineering; Görgülü, Kazım; Vit, Aycan Deniz; Amiri, Ali Najjar; Mağden, Emir Salih; Department of Electrical and Electronics Engineering; Graduate School of Sciences and Engineering; College of EngineeringWe propose a deep photonic interferometer network architecture for designing fabrication-tolerant photonic devices. Our framework incorporates layers of variation-aware, custom-designed Mach-Zehnder interferometers and virtual wafer maps to optimize broadband power splitters under fabrication variations. Specifically, we demonstrate 50/50 splitters with below 1% deviation from the desired 50/50 ratio, even with up to 15 nm over-etch and under-etch variations. The significantly improved device performance under fabrication-induced changes demonstrates the effectiveness of the deep photonic network architecture in designing fabrication-tolerant photonic devices and showcases the potential for improving circuit performance by optimizing for expected variations in waveguide width.Publication Metadata only Stabilization and adiabatic control of antiferromagnetically coupled skyrmions without the topological hall effect(Royal Soc Chemistry, 2023) Department of Electrical and Electronics Engineering; Yağan, Rawana; Cheghabouri, Arash Mousavi; Onbaşlı, Mehmet Cengiz; Department of Electrical and Electronics Engineering; Graduate School of Sciences and Engineering; College of EngineeringSynthetic antiferromagnetically coupled (SAF) multilayers provide different physics of stabilizing skyrmions while eliminating the topological Hall effect (THE), enabling efficient and stable control. The effects of material parameters, external current drive, and a magnetic field on the skyrmion equilibrium and propagation characteristics are largely unresolved. Here, we present a computational and theoretical demonstration of the large window of material parameters that stabilize SAF skyrmions determined by saturation magnetization, uniaxial anisotropy, and Dzyaloshinskii-Moriya interaction. Current-driven SAF skyrmion velocities reach & SIM;200 m s(-1) without the THE. The SAF velocities are about 3-10 times greater than the typical ferromagnetic skyrmion velocities. The current densities needed for driving SAF skyrmions could be reduced to 10(8) A m(-2), while 10(11) A m(-2) or above is needed for ferromagnetic skyrmions. By reducing the SAF skyrmion drive current by 3 orders, Joule heating is reduced by 6 orders of magnitude. These results pave the way for new SAF interfaces with improved equilibrium, dynamics, and power savings in THE-free skyrmionics.Publication Metadata only Kirchhoff meets Johnson: in pursuit of unconditionally secure communication(WILEY, 2024) Department of Electrical and Electronics Engineering; Başar, Ertuğrul; Department of Electrical and Electronics Engineering; College of EngineeringNoise: an enemy to be dealt with and a major factor limiting communication system performance. However, what if there is gold in that garbage? In conventional engineering, our focus is primarily on eliminating, suppressing, combating, or even ignoring noise and its detrimental impacts. Conversely, could we exploit it similarly to biology, which utilizes noise-alike carrier signals to convey information? In this context, the utilization of noise, or noise-alike signals in general, has been put forward as a means to realize unconditionally secure communication systems in the future. In this tutorial article, we begin by tracing the origins of thermal noise-based communication and highlighting one of its significant applications for ensuring unconditionally secure networks: the Kirchhoff-law-Johnson-noise (KLJN) secure key exchange scheme. We then delve into the inherent challenges tied to secure communication and discuss the imperative need for physics-based key distribution schemes in pursuit of unconditional security. Concurrently, we provide a concise overview of quantum key distribution schemes and draw comparisons with their KLJN-based counterparts. Finally, extending beyond wired communication loops, we explore the transmission of noise signals over-the-air and evaluate their potential for stealth and secure wireless communication systems.Publication Metadata only Capacitive and efficient near-infrared stimulation of neurons via an ultrathin AgBiS2 nanocrystal layer(American Chemical Society, 2024) Oh, Jae Taek; Wang, Yongjie; Konstantatos, Gerasimos; Department of Electrical and Electronics Engineering; Balamur, Rıdvan; Karatüm, Onuralp; Önal, Asım; Kaleli, Humeyra Nur; Pehlivan, Çiğdem; Şahin, Afsun; Hasanreisoğlu, Murat; Nizamoğlu, Sedat; Department of Electrical and Electronics Engineering; Koç University Research Center for Translational Medicine (KUTTAM) / Koç Üniversitesi Translasyonel Tıp Araştırma Merkezi (KUTTAM); Graduate School of Sciences and Engineering; Graduate School of Health Sciences; School of Medicine; College of EngineeringColloidal nanocrystals (NCs) exhibit significant potential for photovoltaic bioelectronic interfaces because of their solution processability, tunable energy levels, and inorganic nature, lending them chemical stability. Silver bismuth sulfide (AgBiS2) NCs, free from toxic heavy-metal elements (e.g., Cd, Hg, and Pb), particularly offer an exceptional absorption coefficient exceeding 10(5) cm(-1) in the near-infrared (NIR), surpassing many of their inorganic counterparts. Here, we integrated an ultrathin (24 nm) AgBiS2 NC layer into a water-stable photovoltaic bioelectronic device architecture that showed a high capacitive photocurrent of 2.3 mAcm(-2) in artificial cerebrospinal fluid (aCSF) and ionic charges over 10 mu Ccm(-2) at a low NIR intensity of 0.5 mWmm(-2). The device without encapsulation showed a halftime of 12.5 years under passive accelerated aging test and did not show any toxicity on neurons. Furthermore, patch-clamp electrophysiology on primary hippocampal neurons under whole-cell configuration revealed that the device elicited neuron firing at intensity levels more than an order of magnitude below the established ocular safety limits. These findings point to the potential of AgBiS2 NCs for photovoltaic retinal prostheses.Publication Metadata only Enhancement of resolution and propagation length by sources with temporal decay in plasmonic devices(Springer, 2020) Department of Electrical and Electronics Engineering; Department of Electrical and Electronics Engineering; Tetikol, Hüseyin Serhat; Aksun, M. İrşadi; PhD Student; Faculty Member; Department of Electrical and Electronics Engineering; College of Engineering; College of Engineering; N/A; 28358Highly lossy nature of metals has severely limited the scope of practical applications of plasmonics. The conventional approach to circumvent this limitation has been to search for new materials with more favorable dielectric properties (e.g., reduced loss), or to incorporate gain media to overcome the inherent loss. In this study, however, we turn our attention to the source and show that the wealth of new SPP modes with simultaneous complex frequencies and complex wave vectors that are otherwise unreachable can be excited by imposing temporal decay on the excitation. Therefore, to understand the possible implications of these new modes and how to be able to tune them for specific applications, we propose a framework of pseudo-monochromatic modes that are generated by introducing exponential decays into otherwise monochromatic sources. Within this framework, the dispersion relation of complex SPPs is re-evaluated and cast to be a surface rather than a curve, depicting all possible omega-kpairs (both complex in general) that are supported by the given geometry. To demonstrate the potentials of the complex modes and the use of the framework to study them selectively, we have chosen two important, and somewhat limiting, features of SPPs to investigate; resolution in plasmonic lenses and propagation length in SPP waveguides. While the former is mainly used to validate the proposed method and the framework on the recent improvement of resolution in plasmonic superlenses, the latter provides a novel approach to extend the propagation length of the SPP modes in planar waveguides significantly. Since the improvement in propagation length due to the introduction of temporal decay to the excitation is rather counter-intuitive, the dispersion-based theoretical predictions (the proposed approach) have been validated via the FDTD simulations of Maxwell's equations in the same geometry without any a priori assumptions on the frequency or the wave vector.Publication Metadata only Silk as a biodegradable resist for field-emission scanning probe lithography(Institute of Physics (IOP) Publishing, 2020) Sadeghi, Sadra; Rangelow, Ivo W.; Department of Mechanical Engineering; Department of Electrical and Electronics Engineering; N/A; N/A; Department of Electrical and Electronics Engineering; Alaca, Burhanettin Erdem; Kumar, Baskaran Ganesh; Melikov, Rustamzhon; Doğru-Yüksel, Itır Bakış; Nizamoğlu, Sedat; Faculty Member; Other; PhD Student; PhD Student; Faculty Member; Department of Mechanical Engineering; Department of Electrical and Electronics Engineering; Koç University Surface Science and Technology Center (KUYTAM) / Koç Üniversitesi Yüzey Teknolojileri Araştirmalari Merkezi (KUYTAM); N/A; N/A; N/A; N/A; College of Engineering; College of Engineering; Graduate School of Sciences and Engineering; Graduate School of Sciences and Engineering; College of Engineering; 115108; N/A; N/A; N/A; 130295The patterning of silk allows for manufacturing various structures with advanced functionalities for optical and tissue engineering and drug delivery applications. Here, we propose a high-resolution nanoscale patterning method based on field-emission scanning probe lithography (FE-SPL) that crosslinks the biomaterial silk on conductive indium tin oxide (ITO) promoting the use of a biodegradable material as resist and water as a developer. During the lithographic process, Fowler-Nordheim electron emission from a sharp tip was used to manipulate the structure of silk fibroin from random coil to beta sheet and the emission formed nanoscale latent patterns with a critical dimension (CD) of similar to 50 nm. To demonstrate the versatility of the method, we patterned standard and complex shapes. This method is particularly attractive due to its ease of operation without relying on a vacuum or a special gaseous environment and without any need for complex electronics or optics. Therefore, this study paves a practical and cost-effective way toward patterning biopolymers at ultra-high level resolution.Publication Metadata only Colloidal aluminum antimonide quantum dots(Amer Chemical Soc, 2019) Sahin, Mehmet; Öztürk, Hande; Ow-Yang, Cleva W.; N/A; N/A; Department of Electrical and Electronics Engineering; Jalali, Houman Bahmani; Sadeghi, Sadra; Nizamoğlu, Sedat; PhD Student; PhD Student; PhD Student; Faculty Member; Department of Electrical and Electronics Engineering; Graduate School of Sciences and Engineering; Graduate School of Sciences and Engineering; College of Engineering; N/A; N/A; 130295AlSb is a less studied member of the III-V semiconductor family, and herein, we report the colloidal synthesis of AlSb quantum dots (QDs) for the first time. Different sizes of colloidal AlSb QDs (5 to 9 nm) were produced by the controlled reaction of AlCl3 and Sb[N(Si(Me)(3))(2)](3) in the presence of superhydride. These colloidal AlSb quantum dots showed excitonic transitions in the UV-A region and a tunable band edge emission (quantum yield of up to 18%) in the blue spectral range. Among all III-V quantum dots, these quantum dots show the brightest core emission in the blue spectral region.Publication Metadata only 3D coffee stains(Royal Soc Chemistry, 2017) N/A; N/A; Department of Electrical and Electronics Engineering; N/A; N/A; N/A; Department of Molecular Biology and Genetics; Department of Chemistry; Department of Chemistry; Department of Electrical and Electronics Engineering; Doğru-Yüksel, Itır Bakış; Söz, Çağla Koşak; Press, Daniel Aaron; Melikov, Rustamzhon; Begar, Efe; Çonkar, Deniz; Karalar, Elif Nur Fırat; Yılgör, Emel; Yılgör, İskender; Nizamoğlu, Sedat; PhD Student; PhD Student; Researcher; PhD Student; PhD Student; PhD Student; PhD Student; Faculty Member; Researcher; Faculty Member; Faculty Member; Department of Molecular Biology and Genetics; Department of Chemistry; Department of Electrical and Electronics Engineering; N/A; Koç University Surface Science and Technology Center (KUYTAM) / Koç Üniversitesi Yüzey Teknolojileri Araştırmaları Merkezi (KUYTAM); N/A; N/A; N/A; N/A; N/A; N/A; Koç University Surface Science and Technology Center (KUYTAM) / Koç Üniversitesi Yüzey Teknolojileri Araştırmaları Merkezi (KUYTAM); Koç University Surface Science and Technology Center (KUYTAM) / Koç Üniversitesi Yüzey Teknolojileri Araştırmaları Merkezi (KUYTAM); Koç University Surface Science and Technology Center (KUYTAM) / Koç Üniversitesi Yüzey Teknolojileri Araştırmaları Merkezi (KUYTAM); Graduate School of Sciences and Engineering; Graduate School of Sciences and Engineering; College of Engineering; Graduate School of Sciences and Engineering; Graduate School of Sciences and Engineering; Graduate School of Sciences and Engineering; College of Sciences; College of Sciences; College of Sciences; College of Engineering; N/A; N/A; N/A; N/A; N/A; N/A; 206349; N/A; 24181; 130295When a liquid droplet (e.g., coffee, wine, etc.) is splattered on a surface, the droplet dries in a ring-shaped stain. This widely observed pattern in everyday life occurs due to the phenomenon known as a coffee stain (or coffee ring) effect. While the droplet dries, the capillary flow moves and deposits the particles toward the pinned edges, which shows a 2D ring-like structure. Here we demonstrate the transition from a 2D to a 3D coffee stain that has a well-defined and hollow sphere-like structure, when the substrate surface is switched from hydrophilic to superhydrophobic. The 3D stain formation starts with the evaporation of the pinned aqueous colloidal droplet placed on a superhydrophobic surface that facilitates the particle flow towards the liquid-air interface. This leads to spherical skin formation and a cavity in the droplet. Afterwards the water loss in the cavity due to pervaporation leads to bubble nucleation and growth, until complete evaporation of the solvent. In addition to the superhydrophobicity of the surface, the concentration of the solution also has a significant effect on 3D coffee stain formation. Advantageously, 3D coffee stain formation in a pendant droplet configuration enables the construction of all-protein lasers by integrating silk fibroin with fluorescent proteins. No tools, components and/or human intervention are needed after the construction process is initiated; therefore, 3D coffee-stains hold promise for building self-assembled and functional 3D constructs and devices from colloidal solutions.Publication Metadata only Thickness-dependent double-epitaxial growth in strained SrTi0.7Co0.3O3-delta films(American Chemical Society (ACS), 2018) Tang, Astera S.; Sun, Xueyin; Ross, Caroline A.; Department of Electrical and Electronics Engineering; Onbaşlı, Mehmet Cengiz; Faculty Member; Department of Electrical and Electronics Engineering; College of Engineering; 258783Perovskite-structured SrTi0.7Co0.3O3-delta (STCo) films of varying thicknesses were grown on SrTiO3(001) substrates using pulsed laser deposition. Thin films grow with a cube-on-cube epitaxy, but for films exceeding a critical thickness of about 120 nm, a double-epitaxial microstructure was observed, in which (110)-oriented crystals nucleated within the (001)-oriented STCo matrix, both orientations being epitaxial with the substrate. The crystal structure, strain state, and magnetic properties are described as a function of film thickness. Both the magnetic moment and the coercivity show maxima at the critical thickness. The formation of a double-epitaxial microstructure provides a mechanism for strain relief in epitaxially mismatched films.Publication Metadata only Rate-delay tradeoff with network coding in molecular nanonetworks(IEEE-Inst Electrical Electronics Engineers Inc, 2013) N/A; N/A; Department of Electrical and Electronics Engineering; Ünlütürk, Bige Deniz; Malak, Derya; Akan, Özgür Barış; Master Student; PhD Student; Faculty Member; Department of Electrical and Electronics Engineering; Graduate School of Sciences and Engineering; Graduate School of Sciences and Engineering; College of Engineering; N/A; N/A; 6647Molecular communication is a novel nanoscale communication paradigm, in which information is encoded in messenger molecules for transmission and reception. However, molecular communication is unreliable and has highly varying long propagation delays mainly due to the stochastic behavior of the freely diffusing molecules. Thus, it is essential to analyze its delay characteristics, as well as the tradeoff between the rate and delay, in order to reveal the capabilities and limitations of molecular information transmission in nanonetworks. In this paper, first, a new messenger-based molecular communication model, which includes a nanotransmitter sending information to a nanoreceiver, is introduced. The information is encoded on a polyethylene molecule, CH3(CHX)(n)CH2F, where X stands for H and F atoms representing 0 and 1 bits, respectively. The emission of the molecules is modeled by puffing process which is inspired by the alarm pheromone release by animals in dangerous situations. In this work, the rate-delay characteristics of this messenger-based molecular communication model are explored. Then, a Nano-Relay is inserted in the model, which XOR's the incoming messages from two different nanomachines. Performance evaluation shows that indeed, a simple network coding mechanism significantly improves the rate given delay of the system, and vice versa.